Hb_006132_080

Information

Type -
Description -
Location Contig6132: 60506-62161
Sequence    

Annotation

kegg
ID pop:POPTR_0014s08160g
description POPTRDRAFT_572270; cytochrome P450 family protein
nr
ID XP_012083370.1
description PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
swissprot
ID O80823
description Cytochrome P450 86A8 OS=Arabidopsis thaliana GN=CYP86A8 PE=2 SV=1
trembl
ID A0A067K9X3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14385 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 86a8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51113: 61339-62292 , PASA_asmbl_51114: 62327-62577
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006132_080 0.0 - - PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
2 Hb_002121_050 0.0534257025 - - hypothetical protein EUGRSUZ_D02586 [Eucalyptus grandis]
3 Hb_003186_030 0.0535350574 transcription factor TF Family: MYB hypothetical protein POPTR_0012s05720g [Populus trichocarpa]
4 Hb_004452_070 0.0544634881 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
5 Hb_000251_150 0.0600211391 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
6 Hb_000179_010 0.0601339608 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
7 Hb_011724_040 0.0627867674 - - PREDICTED: uncharacterized protein LOC105632860 [Jatropha curcas]
8 Hb_005743_050 0.0660318503 - - unnamed protein product [Coffea canephora]
9 Hb_033187_010 0.0696344607 - - epoxide hydrolase, putative [Ricinus communis]
10 Hb_002534_020 0.0713983422 - - PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Gossypium raimondii]
11 Hb_000139_170 0.0718534956 - - PREDICTED: uncharacterized protein LOC105631957 [Jatropha curcas]
12 Hb_000987_030 0.0722713606 transcription factor TF Family: BES1 hypothetical protein POPTR_0016s13350g [Populus trichocarpa]
13 Hb_000497_050 0.0737557809 - - PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Jatropha curcas]
14 Hb_000979_120 0.0747327822 - - Pectinesterase-1 precursor, putative [Ricinus communis]
15 Hb_001775_020 0.0755987073 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
16 Hb_001295_070 0.0757417424 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]
17 Hb_158001_010 0.0774592038 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
18 Hb_029991_010 0.0778295128 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
19 Hb_000069_760 0.0781055042 - - PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Jatropha curcas]
20 Hb_000703_340 0.0781427631 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_006132_080 Hb_006132_080 Hb_002121_050 Hb_002121_050 Hb_006132_080--Hb_002121_050 Hb_003186_030 Hb_003186_030 Hb_006132_080--Hb_003186_030 Hb_004452_070 Hb_004452_070 Hb_006132_080--Hb_004452_070 Hb_000251_150 Hb_000251_150 Hb_006132_080--Hb_000251_150 Hb_000179_010 Hb_000179_010 Hb_006132_080--Hb_000179_010 Hb_011724_040 Hb_011724_040 Hb_006132_080--Hb_011724_040 Hb_000497_050 Hb_000497_050 Hb_002121_050--Hb_000497_050 Hb_002752_020 Hb_002752_020 Hb_002121_050--Hb_002752_020 Hb_156093_010 Hb_156093_010 Hb_002121_050--Hb_156093_010 Hb_008225_050 Hb_008225_050 Hb_002121_050--Hb_008225_050 Hb_007537_040 Hb_007537_040 Hb_002121_050--Hb_007537_040 Hb_003186_030--Hb_004452_070 Hb_003186_030--Hb_000251_150 Hb_001191_060 Hb_001191_060 Hb_003186_030--Hb_001191_060 Hb_003033_020 Hb_003033_020 Hb_003186_030--Hb_003033_020 Hb_001348_160 Hb_001348_160 Hb_003186_030--Hb_001348_160 Hb_004452_070--Hb_000251_150 Hb_001936_100 Hb_001936_100 Hb_004452_070--Hb_001936_100 Hb_001049_130 Hb_001049_130 Hb_004452_070--Hb_001049_130 Hb_000703_340 Hb_000703_340 Hb_004452_070--Hb_000703_340 Hb_000987_030 Hb_000987_030 Hb_000251_150--Hb_000987_030 Hb_000046_400 Hb_000046_400 Hb_000251_150--Hb_000046_400 Hb_005743_050 Hb_005743_050 Hb_000251_150--Hb_005743_050 Hb_029879_020 Hb_029879_020 Hb_000251_150--Hb_029879_020 Hb_000251_150--Hb_000179_010 Hb_004837_010 Hb_004837_010 Hb_000179_010--Hb_004837_010 Hb_001307_050 Hb_001307_050 Hb_000179_010--Hb_001307_050 Hb_158001_010 Hb_158001_010 Hb_000179_010--Hb_158001_010 Hb_000179_010--Hb_000046_400 Hb_029991_010 Hb_029991_010 Hb_000179_010--Hb_029991_010 Hb_002534_020 Hb_002534_020 Hb_011724_040--Hb_002534_020 Hb_001534_060 Hb_001534_060 Hb_011724_040--Hb_001534_060 Hb_003632_020 Hb_003632_020 Hb_011724_040--Hb_003632_020 Hb_011724_040--Hb_002121_050 Hb_033187_010 Hb_033187_010 Hb_011724_040--Hb_033187_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0245074 0.0710363 10.0222 6.21729 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.236183 19.632

CAGE analysis