Hb_001195_580

Information

Type -
Description -
Location Contig1195: 384777-386210
Sequence    

Annotation

kegg
ID pop:POPTR_0014s04130g
description hypothetical protein
nr
ID XP_006375073.1
description hypothetical protein POPTR_0014s04130g [Populus trichocarpa]
swissprot
ID Q40287
description Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5 PE=2 SV=1
trembl
ID B9MVE1
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s04130g PE=4 SV=1
Gene Ontology
ID GO:0016758
description hydroquinone glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_580 0.0 - - hypothetical protein POPTR_0014s04130g [Populus trichocarpa]
2 Hb_000373_290 0.1518747664 - - RecName: Full=Citrate-binding protein; Flags: Precursor [Hevea brasiliensis]
3 Hb_000641_030 0.1791040398 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
4 Hb_002863_010 0.191785729 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]
5 Hb_001195_590 0.1967354139 - - PREDICTED: uncharacterized protein LOC105633753 [Jatropha curcas]
6 Hb_000376_110 0.1980953552 - - PREDICTED: O-acyltransferase WSD1-like [Brachypodium distachyon]
7 Hb_004724_430 0.200159235 - - PREDICTED: F-box protein At2g27310 [Jatropha curcas]
8 Hb_023988_020 0.2052850794 - - PREDICTED: transmembrane protein 19 [Prunus mume]
9 Hb_003913_100 0.2063990982 - - copper amine oxidase, putative [Ricinus communis]
10 Hb_002835_190 0.2065440592 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
11 Hb_000376_150 0.207309942 - - O-acyltransferase WSD1 [Gossypium arboreum]
12 Hb_000920_140 0.2091555817 - - annexin [Manihot esculenta]
13 Hb_005590_030 0.2119877915 - - PREDICTED: (S)-coclaurine N-methyltransferase [Jatropha curcas]
14 Hb_000028_050 0.2135926255 - - aldose-1-epimerase, putative [Ricinus communis]
15 Hb_000566_140 0.2149642354 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 16 [Jatropha curcas]
16 Hb_011537_040 0.2174421119 - - PREDICTED: uncharacterized protein LOC105646229 [Jatropha curcas]
17 Hb_000613_200 0.2182329442 rubber biosynthesis Gene Name: Acetyl-CoA acetyltransferase acetyl-CoA C-acetyltransferase [Hevea brasiliensis]
18 Hb_006735_040 0.2212281103 - - unnamed protein product [Vitis vinifera]
19 Hb_003304_080 0.2231781288 transcription factor TF Family: bHLH lMYC3 [Hevea brasiliensis]
20 Hb_004545_050 0.2241740903 - - Cu/Zn superoxide dismutase [Hevea brasiliensis]

Gene co-expression network

sample Hb_001195_580 Hb_001195_580 Hb_000373_290 Hb_000373_290 Hb_001195_580--Hb_000373_290 Hb_000641_030 Hb_000641_030 Hb_001195_580--Hb_000641_030 Hb_002863_010 Hb_002863_010 Hb_001195_580--Hb_002863_010 Hb_001195_590 Hb_001195_590 Hb_001195_580--Hb_001195_590 Hb_000376_110 Hb_000376_110 Hb_001195_580--Hb_000376_110 Hb_004724_430 Hb_004724_430 Hb_001195_580--Hb_004724_430 Hb_000920_140 Hb_000920_140 Hb_000373_290--Hb_000920_140 Hb_023988_020 Hb_023988_020 Hb_000373_290--Hb_023988_020 Hb_000373_290--Hb_000641_030 Hb_005271_170 Hb_005271_170 Hb_000373_290--Hb_005271_170 Hb_019516_040 Hb_019516_040 Hb_000373_290--Hb_019516_040 Hb_003304_050 Hb_003304_050 Hb_000641_030--Hb_003304_050 Hb_000641_030--Hb_000376_110 Hb_000376_150 Hb_000376_150 Hb_000641_030--Hb_000376_150 Hb_003687_200 Hb_003687_200 Hb_000641_030--Hb_003687_200 Hb_000641_030--Hb_000920_140 Hb_000416_100 Hb_000416_100 Hb_000641_030--Hb_000416_100 Hb_004607_120 Hb_004607_120 Hb_002863_010--Hb_004607_120 Hb_023675_010 Hb_023675_010 Hb_002863_010--Hb_023675_010 Hb_000175_520 Hb_000175_520 Hb_002863_010--Hb_000175_520 Hb_012395_100 Hb_012395_100 Hb_002863_010--Hb_012395_100 Hb_007625_020 Hb_007625_020 Hb_002863_010--Hb_007625_020 Hb_000366_100 Hb_000366_100 Hb_002863_010--Hb_000366_100 Hb_001741_050 Hb_001741_050 Hb_001195_590--Hb_001741_050 Hb_000088_060 Hb_000088_060 Hb_001195_590--Hb_000088_060 Hb_005590_030 Hb_005590_030 Hb_001195_590--Hb_005590_030 Hb_006557_010 Hb_006557_010 Hb_001195_590--Hb_006557_010 Hb_089140_080 Hb_089140_080 Hb_001195_590--Hb_089140_080 Hb_000376_110--Hb_000920_140 Hb_000376_110--Hb_023988_020 Hb_004032_440 Hb_004032_440 Hb_000376_110--Hb_004032_440 Hb_001696_030 Hb_001696_030 Hb_000376_110--Hb_001696_030 Hb_007810_040 Hb_007810_040 Hb_000376_110--Hb_007810_040 Hb_001956_120 Hb_001956_120 Hb_004724_430--Hb_001956_120 Hb_011537_040 Hb_011537_040 Hb_004724_430--Hb_011537_040 Hb_000347_080 Hb_000347_080 Hb_004724_430--Hb_000347_080 Hb_000165_130 Hb_000165_130 Hb_004724_430--Hb_000165_130 Hb_012977_010 Hb_012977_010 Hb_004724_430--Hb_012977_010 Hb_000176_110 Hb_000176_110 Hb_004724_430--Hb_000176_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
144.954 13.6313 1.17118 50.0734 172.483 102.169
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
153.161 51.2922 11.1146 1.09566 0

CAGE analysis