Hb_001168_010

Information

Type -
Description -
Location Contig1168: 527-1144
Sequence    

Annotation

kegg
ID tcc:TCM_040969
description Leucoanthocyanidin dioxygenase, putative
nr
ID XP_012076007.1
description PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
swissprot
ID Q9C899
description Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1
trembl
ID A0A067KQI4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11110 PE=3 SV=1
Gene Ontology
ID GO:0005506
description feruloyl ortho-hydroxylase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001168_010 0.0 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
2 Hb_000327_300 0.104699688 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]
3 Hb_000245_140 0.1116717986 - - PREDICTED: CASP-like protein 3A1 [Jatropha curcas]
4 Hb_000631_130 0.1126026182 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
5 Hb_004586_080 0.1177506819 - - hypothetical protein POPTR_0002s10520g [Populus trichocarpa]
6 Hb_008080_040 0.1184077056 - - hypothetical protein EUGRSUZ_D00834 [Eucalyptus grandis]
7 Hb_000038_090 0.1185229284 transcription factor TF Family: NAC hypothetical protein POPTR_0002s05820g [Populus trichocarpa]
8 Hb_025469_040 0.121428123 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
9 Hb_002965_020 0.1269388327 - - hypothetical protein JCGZ_18947 [Jatropha curcas]
10 Hb_000407_110 0.1283494482 - - ripening-induced ACC oxidase [Carica papaya]
11 Hb_007044_070 0.1329055796 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
12 Hb_156144_040 0.1337512964 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
13 Hb_000563_610 0.1344828456 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
14 Hb_007747_030 0.1403881347 - - PREDICTED: WD repeat-containing protein LWD2-like [Jatropha curcas]
15 Hb_148914_010 0.1412784636 - - glutathione s-transferase, putative [Ricinus communis]
16 Hb_002917_010 0.1416474502 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
17 Hb_020902_020 0.1446023506 - - hypothetical protein JCGZ_07820 [Jatropha curcas]
18 Hb_131864_020 0.1448675612 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
19 Hb_001473_100 0.1457524812 - - chalcone synthase 1 [Jatropha curcas]
20 Hb_000057_160 0.1472502365 - - hypothetical protein JCGZ_06279 [Jatropha curcas]

Gene co-expression network

sample Hb_001168_010 Hb_001168_010 Hb_000327_300 Hb_000327_300 Hb_001168_010--Hb_000327_300 Hb_000245_140 Hb_000245_140 Hb_001168_010--Hb_000245_140 Hb_000631_130 Hb_000631_130 Hb_001168_010--Hb_000631_130 Hb_004586_080 Hb_004586_080 Hb_001168_010--Hb_004586_080 Hb_008080_040 Hb_008080_040 Hb_001168_010--Hb_008080_040 Hb_000038_090 Hb_000038_090 Hb_001168_010--Hb_000038_090 Hb_000327_300--Hb_004586_080 Hb_000327_300--Hb_008080_040 Hb_002965_020 Hb_002965_020 Hb_000327_300--Hb_002965_020 Hb_000407_110 Hb_000407_110 Hb_000327_300--Hb_000407_110 Hb_001357_260 Hb_001357_260 Hb_000327_300--Hb_001357_260 Hb_002232_370 Hb_002232_370 Hb_000245_140--Hb_002232_370 Hb_000245_140--Hb_002965_020 Hb_148914_010 Hb_148914_010 Hb_000245_140--Hb_148914_010 Hb_000976_020 Hb_000976_020 Hb_000245_140--Hb_000976_020 Hb_000648_120 Hb_000648_120 Hb_000245_140--Hb_000648_120 Hb_000563_610 Hb_000563_610 Hb_000245_140--Hb_000563_610 Hb_000631_130--Hb_000038_090 Hb_001473_100 Hb_001473_100 Hb_000631_130--Hb_001473_100 Hb_025469_040 Hb_025469_040 Hb_000631_130--Hb_025469_040 Hb_007044_070 Hb_007044_070 Hb_000631_130--Hb_007044_070 Hb_000933_200 Hb_000933_200 Hb_000631_130--Hb_000933_200 Hb_131864_020 Hb_131864_020 Hb_000631_130--Hb_131864_020 Hb_004586_080--Hb_008080_040 Hb_004586_080--Hb_001357_260 Hb_004586_080--Hb_000407_110 Hb_007483_030 Hb_007483_030 Hb_004586_080--Hb_007483_030 Hb_008705_070 Hb_008705_070 Hb_004586_080--Hb_008705_070 Hb_008080_040--Hb_000407_110 Hb_008080_040--Hb_002965_020 Hb_020902_020 Hb_020902_020 Hb_008080_040--Hb_020902_020 Hb_008080_040--Hb_001357_260 Hb_000038_090--Hb_001473_100 Hb_000038_090--Hb_000933_200 Hb_000038_090--Hb_000327_300 Hb_007747_030 Hb_007747_030 Hb_000038_090--Hb_007747_030 Hb_000038_090--Hb_000407_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.166719 3.45443 3.99384 1.17979 0.0782891 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.400318 34.2748 0.443112

CAGE analysis