Hb_001102_150

Information

Type -
Description -
Location Contig1102: 135465-146681
Sequence    

Annotation

kegg
ID pop:POPTR_0018s13260g
description POPTRDRAFT_736610; hypothetical protein
nr
ID XP_012079724.1
description PREDICTED: ethanolamine-phosphate cytidylyltransferase-like isoform X1 [Jatropha curcas]
swissprot
ID Q9ZVI9
description Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana GN=PECT1 PE=1 SV=1
trembl
ID A0A067LF40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17440 PE=4 SV=1
Gene Ontology
ID GO:0031307
description ethanolamine-phosphate cytidylyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03147: 134968-146436 , PASA_asmbl_03148: 144717-145041 , PASA_asmbl_03149: 135154-135399
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001102_150 0.0 - - PREDICTED: ethanolamine-phosphate cytidylyltransferase-like isoform X1 [Jatropha curcas]
2 Hb_002805_070 0.0897603519 transcription factor TF Family: HB PREDICTED: homeobox protein 10 isoform X2 [Jatropha curcas]
3 Hb_004732_020 0.102677614 - - PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1 [Populus euphratica]
4 Hb_039253_010 0.1050866556 - - PREDICTED: zinc finger CCCH domain-containing protein 31 isoform X2 [Jatropha curcas]
5 Hb_006114_030 0.1087153296 transcription factor TF Family: SET hypothetical protein CISIN_1g011639mg [Citrus sinensis]
6 Hb_009117_030 0.1129841808 - - PREDICTED: histidine protein methyltransferase 1 homolog isoform X2 [Jatropha curcas]
7 Hb_000424_240 0.1140010028 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Jatropha curcas]
8 Hb_007192_080 0.1154949171 - - PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Jatropha curcas]
9 Hb_000364_150 0.1156383901 - - -
10 Hb_001691_120 0.1157114474 desease resistance Gene Name: AAA PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
11 Hb_001840_070 0.1166467937 - - DNA binding protein, putative [Ricinus communis]
12 Hb_007380_090 0.1174335693 - - -
13 Hb_020719_030 0.1175448308 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
14 Hb_023001_060 0.1178762089 - - PREDICTED: importin-11 [Jatropha curcas]
15 Hb_003673_060 0.1182285665 - - PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 [Jatropha curcas]
16 Hb_001266_080 0.1205674564 - - PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Jatropha curcas]
17 Hb_033834_060 0.1216139942 - - DNA-binding bromodomain-containing family protein [Populus trichocarpa]
18 Hb_002600_140 0.1217607743 - - PREDICTED: protein FLX-like 2 [Jatropha curcas]
19 Hb_002027_270 0.1227096418 - - PREDICTED: serine/threonine-protein phosphatase BSL1 [Jatropha curcas]
20 Hb_011716_020 0.1227809651 - - PREDICTED: uncharacterized protein LOC105637783 [Jatropha curcas]

Gene co-expression network

sample Hb_001102_150 Hb_001102_150 Hb_002805_070 Hb_002805_070 Hb_001102_150--Hb_002805_070 Hb_004732_020 Hb_004732_020 Hb_001102_150--Hb_004732_020 Hb_039253_010 Hb_039253_010 Hb_001102_150--Hb_039253_010 Hb_006114_030 Hb_006114_030 Hb_001102_150--Hb_006114_030 Hb_009117_030 Hb_009117_030 Hb_001102_150--Hb_009117_030 Hb_000424_240 Hb_000424_240 Hb_001102_150--Hb_000424_240 Hb_090804_010 Hb_090804_010 Hb_002805_070--Hb_090804_010 Hb_002805_070--Hb_039253_010 Hb_011689_020 Hb_011689_020 Hb_002805_070--Hb_011689_020 Hb_005839_060 Hb_005839_060 Hb_002805_070--Hb_005839_060 Hb_033834_060 Hb_033834_060 Hb_002805_070--Hb_033834_060 Hb_005147_060 Hb_005147_060 Hb_004732_020--Hb_005147_060 Hb_005211_100 Hb_005211_100 Hb_004732_020--Hb_005211_100 Hb_003777_310 Hb_003777_310 Hb_004732_020--Hb_003777_310 Hb_023001_060 Hb_023001_060 Hb_004732_020--Hb_023001_060 Hb_001691_120 Hb_001691_120 Hb_004732_020--Hb_001691_120 Hb_007192_080 Hb_007192_080 Hb_004732_020--Hb_007192_080 Hb_002023_020 Hb_002023_020 Hb_039253_010--Hb_002023_020 Hb_000364_150 Hb_000364_150 Hb_039253_010--Hb_000364_150 Hb_003656_140 Hb_003656_140 Hb_039253_010--Hb_003656_140 Hb_012286_050 Hb_012286_050 Hb_039253_010--Hb_012286_050 Hb_002374_050 Hb_002374_050 Hb_006114_030--Hb_002374_050 Hb_004689_050 Hb_004689_050 Hb_006114_030--Hb_004689_050 Hb_006114_030--Hb_033834_060 Hb_003673_060 Hb_003673_060 Hb_006114_030--Hb_003673_060 Hb_000046_440 Hb_000046_440 Hb_006114_030--Hb_000046_440 Hb_002784_060 Hb_002784_060 Hb_006114_030--Hb_002784_060 Hb_005016_050 Hb_005016_050 Hb_009117_030--Hb_005016_050 Hb_001266_080 Hb_001266_080 Hb_009117_030--Hb_001266_080 Hb_000889_020 Hb_000889_020 Hb_009117_030--Hb_000889_020 Hb_003333_060 Hb_003333_060 Hb_009117_030--Hb_003333_060 Hb_032458_010 Hb_032458_010 Hb_009117_030--Hb_032458_010 Hb_000166_110 Hb_000166_110 Hb_009117_030--Hb_000166_110 Hb_000424_240--Hb_012286_050 Hb_000307_200 Hb_000307_200 Hb_000424_240--Hb_000307_200 Hb_006026_040 Hb_006026_040 Hb_000424_240--Hb_006026_040 Hb_000696_350 Hb_000696_350 Hb_000424_240--Hb_000696_350 Hb_025814_010 Hb_025814_010 Hb_000424_240--Hb_025814_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.9235 9.55646 10.7168 29.3473 49.5005 94.3108
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
44.5815 19.4557 33.3258 48.305 23.3843

CAGE analysis