Hb_000861_030

Information

Type -
Description -
Location Contig861: 8554-9050
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000861_030 0.0 - - -
2 Hb_000953_060 0.1670965138 - - PREDICTED: putative phytosulfokines 6 [Vitis vinifera]
3 Hb_005410_040 0.1739867596 - - PREDICTED: probable ADP,ATP carrier protein At5g56450 [Jatropha curcas]
4 Hb_000891_040 0.1772865987 - - hypothetical protein JCGZ_11252 [Jatropha curcas]
5 Hb_056506_050 0.1779722121 - - hypothetical protein B456_007G294000 [Gossypium raimondii]
6 Hb_004883_060 0.2060391856 - - PREDICTED: uncharacterized protein LOC105647345 isoform X1 [Jatropha curcas]
7 Hb_004342_030 0.2223309335 - - phosphofructokinase [Hevea brasiliensis]
8 Hb_181320_010 0.2258323982 - - PREDICTED: signal recognition particle 14 kDa protein [Jatropha curcas]
9 Hb_000122_140 0.2268170711 - - -
10 Hb_000995_050 0.230285172 - - 40S ribosomal protein S17C [Hevea brasiliensis]
11 Hb_000270_500 0.2314546536 - - PREDICTED: uncharacterized protein LOC105640439 [Jatropha curcas]
12 Hb_000705_220 0.2321878658 - - unnamed protein product [Vitis vinifera]
13 Hb_012807_080 0.2326013797 - - hypothetical protein CICLE_v10028099mg [Citrus clementina]
14 Hb_000041_220 0.2333366791 - - polyribonucleotide nucleotidyltransferase, putative [Ricinus communis]
15 Hb_176117_010 0.2358441344 - - Cold-inducible RNA-binding protein [Morus notabilis]
16 Hb_003061_010 0.2362614453 - - hypothetical protein SORBIDRAFT_01g039870 [Sorghum bicolor]
17 Hb_002197_030 0.239020406 - - PREDICTED: MATH domain-containing protein At5g43560-like isoform X2 [Jatropha curcas]
18 Hb_080530_020 0.2403562114 - - -
19 Hb_144898_010 0.2405581379 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
20 Hb_000510_090 0.2442262825 - - 40S ribosomal protein S15 [Morus notabilis]

Gene co-expression network

sample Hb_000861_030 Hb_000861_030 Hb_000953_060 Hb_000953_060 Hb_000861_030--Hb_000953_060 Hb_005410_040 Hb_005410_040 Hb_000861_030--Hb_005410_040 Hb_000891_040 Hb_000891_040 Hb_000861_030--Hb_000891_040 Hb_056506_050 Hb_056506_050 Hb_000861_030--Hb_056506_050 Hb_004883_060 Hb_004883_060 Hb_000861_030--Hb_004883_060 Hb_004342_030 Hb_004342_030 Hb_000861_030--Hb_004342_030 Hb_080530_020 Hb_080530_020 Hb_000953_060--Hb_080530_020 Hb_181320_010 Hb_181320_010 Hb_000953_060--Hb_181320_010 Hb_176117_010 Hb_176117_010 Hb_000953_060--Hb_176117_010 Hb_000122_140 Hb_000122_140 Hb_000953_060--Hb_000122_140 Hb_005016_150 Hb_005016_150 Hb_000953_060--Hb_005016_150 Hb_000705_220 Hb_000705_220 Hb_005410_040--Hb_000705_220 Hb_005215_080 Hb_005215_080 Hb_005410_040--Hb_005215_080 Hb_020902_010 Hb_020902_010 Hb_005410_040--Hb_020902_010 Hb_155375_010 Hb_155375_010 Hb_005410_040--Hb_155375_010 Hb_000510_090 Hb_000510_090 Hb_005410_040--Hb_000510_090 Hb_000442_160 Hb_000442_160 Hb_005410_040--Hb_000442_160 Hb_006637_060 Hb_006637_060 Hb_000891_040--Hb_006637_060 Hb_007632_250 Hb_007632_250 Hb_000891_040--Hb_007632_250 Hb_119583_010 Hb_119583_010 Hb_000891_040--Hb_119583_010 Hb_000891_040--Hb_000510_090 Hb_000442_100 Hb_000442_100 Hb_000891_040--Hb_000442_100 Hb_000891_040--Hb_181320_010 Hb_056199_010 Hb_056199_010 Hb_056506_050--Hb_056199_010 Hb_056506_050--Hb_000705_220 Hb_056506_050--Hb_005410_040 Hb_000295_100 Hb_000295_100 Hb_056506_050--Hb_000295_100 Hb_056506_050--Hb_000891_040 Hb_004883_060--Hb_005410_040 Hb_003073_210 Hb_003073_210 Hb_004883_060--Hb_003073_210 Hb_171789_010 Hb_171789_010 Hb_004883_060--Hb_171789_010 Hb_139859_010 Hb_139859_010 Hb_004883_060--Hb_139859_010 Hb_000139_240 Hb_000139_240 Hb_004883_060--Hb_000139_240 Hb_000009_620 Hb_000009_620 Hb_004342_030--Hb_000009_620 Hb_034299_040 Hb_034299_040 Hb_004342_030--Hb_034299_040 Hb_001902_070 Hb_001902_070 Hb_004342_030--Hb_001902_070 Hb_000041_220 Hb_000041_220 Hb_004342_030--Hb_000041_220 Hb_000398_190 Hb_000398_190 Hb_004342_030--Hb_000398_190 Hb_000270_220 Hb_000270_220 Hb_004342_030--Hb_000270_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.26549 0.183491 0.234465 0.162939 0.658389 3.29183
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.445424 1.2247 0.274854 1.36609 0

CAGE analysis