Hb_000484_040

Information

Type -
Description -
Location Contig484: 93832-95965
Sequence    

Annotation

kegg
ID pxb:103946619
description zeaxanthin epoxidase, chloroplastic-like
nr
ID XP_012081816.1
description PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
swissprot
ID Q9I0Q0
description 2-heptyl-3-hydroxy-4(1H)-quinolone synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pqsH PE=3 SV=1
trembl
ID A0A067K3S0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18850 PE=4 SV=1
Gene Ontology
ID GO:0016491
description zeaxanthin chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44908: 94066-95074 , PASA_asmbl_44909: 94462-95074
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000484_040 0.0 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
2 Hb_001005_210 0.1081689918 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
3 Hb_032631_080 0.1253674431 - - PREDICTED: L-Ala-D/L-amino acid epimerase-like isoform X2 [Jatropha curcas]
4 Hb_000844_090 0.1290109613 - - PREDICTED: cytochrome P450 82C4-like [Jatropha curcas]
5 Hb_001279_220 0.1425412956 - - protein binding protein, putative [Ricinus communis]
6 Hb_001454_300 0.1446055227 - - nucleotide binding protein, putative [Ricinus communis]
7 Hb_001369_320 0.1489998303 - - PREDICTED: dynein light chain, cytoplasmic-like [Jatropha curcas]
8 Hb_074892_010 0.1496672962 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
9 Hb_000567_300 0.1514099316 - - PREDICTED: protein YLS9-like [Jatropha curcas]
10 Hb_000075_030 0.1532820549 - - PREDICTED: aldo-keto reductase family 4 member C10-like [Fragaria vesca subsp. vesca]
11 Hb_001004_130 0.1555854162 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
12 Hb_000061_360 0.1559159255 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
13 Hb_004881_080 0.1624590754 - - PREDICTED: glycerol-3-phosphate acyltransferase 1 [Populus euphratica]
14 Hb_000215_420 0.1654469013 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2-like [Populus euphratica]
15 Hb_004519_010 0.1684177476 - - PREDICTED: basic form of pathogenesis-related protein 1-like [Jatropha curcas]
16 Hb_002218_040 0.1688414038 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000705_060 0.1735933746 - - hypothetical protein TRIUR3_06087 [Triticum urartu]
18 Hb_000566_110 0.1741228556 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Prunus mume]
19 Hb_007101_210 0.1747922758 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_002248_020 0.1765629519 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000484_040 Hb_000484_040 Hb_001005_210 Hb_001005_210 Hb_000484_040--Hb_001005_210 Hb_032631_080 Hb_032631_080 Hb_000484_040--Hb_032631_080 Hb_000844_090 Hb_000844_090 Hb_000484_040--Hb_000844_090 Hb_001279_220 Hb_001279_220 Hb_000484_040--Hb_001279_220 Hb_001454_300 Hb_001454_300 Hb_000484_040--Hb_001454_300 Hb_001369_320 Hb_001369_320 Hb_000484_040--Hb_001369_320 Hb_000075_030 Hb_000075_030 Hb_001005_210--Hb_000075_030 Hb_001005_210--Hb_032631_080 Hb_001004_130 Hb_001004_130 Hb_001005_210--Hb_001004_130 Hb_001005_210--Hb_000844_090 Hb_001691_060 Hb_001691_060 Hb_001005_210--Hb_001691_060 Hb_032631_080--Hb_000075_030 Hb_001922_010 Hb_001922_010 Hb_032631_080--Hb_001922_010 Hb_032631_080--Hb_001691_060 Hb_109673_010 Hb_109673_010 Hb_032631_080--Hb_109673_010 Hb_004881_080 Hb_004881_080 Hb_032631_080--Hb_004881_080 Hb_000844_090--Hb_001004_130 Hb_001300_140 Hb_001300_140 Hb_000844_090--Hb_001300_140 Hb_011440_010 Hb_011440_010 Hb_000844_090--Hb_011440_010 Hb_005333_210 Hb_005333_210 Hb_000844_090--Hb_005333_210 Hb_004586_110 Hb_004586_110 Hb_000844_090--Hb_004586_110 Hb_175968_010 Hb_175968_010 Hb_001279_220--Hb_175968_010 Hb_004774_060 Hb_004774_060 Hb_001279_220--Hb_004774_060 Hb_001279_220--Hb_001454_300 Hb_001279_220--Hb_001369_320 Hb_000659_010 Hb_000659_010 Hb_001279_220--Hb_000659_010 Hb_004712_080 Hb_004712_080 Hb_001279_220--Hb_004712_080 Hb_001454_300--Hb_001369_320 Hb_001454_300--Hb_175968_010 Hb_001454_300--Hb_004712_080 Hb_001454_300--Hb_001691_060 Hb_001775_050 Hb_001775_050 Hb_001454_300--Hb_001775_050 Hb_000057_160 Hb_000057_160 Hb_001369_320--Hb_000057_160 Hb_001369_320--Hb_001775_050 Hb_129204_050 Hb_129204_050 Hb_001369_320--Hb_129204_050 Hb_020902_020 Hb_020902_020 Hb_001369_320--Hb_020902_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.014716 1.1379 12.6178 2.18876 0 0.197671
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.134185 0 0.296765 48.9218 10.0214

CAGE analysis