Hb_000057_160

Information

Type -
Description -
Location Contig57: 216610-240832
Sequence    

Annotation

kegg
ID fve:101302120
description G-type lectin S-receptor-like serine/threonine-protein kinase B120-like
nr
ID KDP37223.1
description hypothetical protein JCGZ_06279 [Jatropha curcas]
swissprot
ID Q9LW83
description G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2
trembl
ID A0A067KQJ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06279 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000057_160 0.0 - - hypothetical protein JCGZ_06279 [Jatropha curcas]
2 Hb_001369_320 0.1012592542 - - PREDICTED: dynein light chain, cytoplasmic-like [Jatropha curcas]
3 Hb_001775_050 0.112244667 - - ribosome-inactivating protein cucurmosin-like [Jatropha curcas]
4 Hb_001279_220 0.1232381793 - - protein binding protein, putative [Ricinus communis]
5 Hb_001454_300 0.1326392691 - - nucleotide binding protein, putative [Ricinus communis]
6 Hb_129204_050 0.1349139262 transcription factor TF Family: MYB-related PREDICTED: myb-related protein 330-like [Prunus mume]
7 Hb_029571_010 0.1383638119 - - PREDICTED: polygalacturonase QRT3 [Jatropha curcas]
8 Hb_004774_060 0.1389674522 - - -
9 Hb_020902_020 0.1427078281 - - hypothetical protein JCGZ_07820 [Jatropha curcas]
10 Hb_001464_010 0.1460230706 - - PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Populus euphratica]
11 Hb_001168_010 0.1472502365 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
12 Hb_175968_010 0.1509686458 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
13 Hb_002248_020 0.1514961972 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]
14 Hb_004055_180 0.1526487061 - - cell wall invertase [Manihot esculenta]
15 Hb_001936_030 0.1529152776 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
16 Hb_025469_040 0.1565850796 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
17 Hb_004712_080 0.1631032748 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
18 Hb_000631_130 0.1656391798 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
19 Hb_007044_070 0.1657659494 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
20 Hb_097908_010 0.1658733135 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000057_160 Hb_000057_160 Hb_001369_320 Hb_001369_320 Hb_000057_160--Hb_001369_320 Hb_001775_050 Hb_001775_050 Hb_000057_160--Hb_001775_050 Hb_001279_220 Hb_001279_220 Hb_000057_160--Hb_001279_220 Hb_001454_300 Hb_001454_300 Hb_000057_160--Hb_001454_300 Hb_129204_050 Hb_129204_050 Hb_000057_160--Hb_129204_050 Hb_029571_010 Hb_029571_010 Hb_000057_160--Hb_029571_010 Hb_001369_320--Hb_001454_300 Hb_001369_320--Hb_001279_220 Hb_001369_320--Hb_001775_050 Hb_001369_320--Hb_129204_050 Hb_020902_020 Hb_020902_020 Hb_001369_320--Hb_020902_020 Hb_001775_050--Hb_020902_020 Hb_001775_050--Hb_129204_050 Hb_005653_100 Hb_005653_100 Hb_001775_050--Hb_005653_100 Hb_001775_050--Hb_001454_300 Hb_175968_010 Hb_175968_010 Hb_001279_220--Hb_175968_010 Hb_004774_060 Hb_004774_060 Hb_001279_220--Hb_004774_060 Hb_001279_220--Hb_001454_300 Hb_000659_010 Hb_000659_010 Hb_001279_220--Hb_000659_010 Hb_004712_080 Hb_004712_080 Hb_001279_220--Hb_004712_080 Hb_001454_300--Hb_175968_010 Hb_001454_300--Hb_004712_080 Hb_001691_060 Hb_001691_060 Hb_001454_300--Hb_001691_060 Hb_000705_100 Hb_000705_100 Hb_129204_050--Hb_000705_100 Hb_000705_060 Hb_000705_060 Hb_129204_050--Hb_000705_060 Hb_001101_020 Hb_001101_020 Hb_129204_050--Hb_001101_020 Hb_002248_020 Hb_002248_020 Hb_029571_010--Hb_002248_020 Hb_004055_180 Hb_004055_180 Hb_029571_010--Hb_004055_180 Hb_029571_010--Hb_004774_060 Hb_029571_010--Hb_001279_220 Hb_001464_010 Hb_001464_010 Hb_029571_010--Hb_001464_010 Hb_097908_010 Hb_097908_010 Hb_029571_010--Hb_097908_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00315999 0.013492 0.045299 0.00458435 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.24931 0.0121137

CAGE analysis