Hb_000357_140

Information

Type -
Description -
Location Contig357: 187423-191226
Sequence    

Annotation

kegg
ID sly:101251765
description uncharacterized LOC101251765
nr
ID KDP45224.1
description hypothetical protein JCGZ_15089 [Jatropha curcas]
swissprot
ID Q93XX2
description Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana GN=SEOA PE=1 SV=1
trembl
ID A0A067LLK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15089 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000357_140 0.0 - - hypothetical protein JCGZ_15089 [Jatropha curcas]
2 Hb_017908_010 0.113070098 - - conserved hypothetical protein [Ricinus communis]
3 Hb_059554_010 0.1191272574 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
4 Hb_015934_050 0.1385587851 - - PREDICTED: transcription factor PAR2-like [Jatropha curcas]
5 Hb_000107_280 0.1547762341 - - serine/threonine protein kinase, putative [Ricinus communis]
6 Hb_000020_170 0.1586425799 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]
7 Hb_000109_200 0.160243169 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
8 Hb_001673_090 0.164395739 - - hypothetical protein POPTR_0006s21590g [Populus trichocarpa]
9 Hb_004686_040 0.1650796992 - - hypothetical protein POPTR_0016s05690g [Populus trichocarpa]
10 Hb_029883_010 0.1671400222 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_007317_050 0.168288172 - - hypothetical protein POPTR_0009s16550g [Populus trichocarpa]
12 Hb_025193_010 0.1690273733 - - PREDICTED: indole-3-acetic acid-amido synthetase GH3.17-like isoform X1 [Jatropha curcas]
13 Hb_001568_040 0.1711312789 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000134_190 0.173602112 - - hypothetical protein JCGZ_16725 [Jatropha curcas]
15 Hb_123713_010 0.1774831793 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_016734_110 0.1797884669 transcription factor TF Family: MYB-related hypothetical protein POPTR_0005s12390g [Populus trichocarpa]
17 Hb_000049_190 0.1799519133 - - nucleotide binding protein, putative [Ricinus communis]
18 Hb_000487_130 0.1807517428 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
19 Hb_050898_040 0.1824841921 - - -
20 Hb_023582_030 0.1833142761 - - WD-repeat protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000357_140 Hb_000357_140 Hb_017908_010 Hb_017908_010 Hb_000357_140--Hb_017908_010 Hb_059554_010 Hb_059554_010 Hb_000357_140--Hb_059554_010 Hb_015934_050 Hb_015934_050 Hb_000357_140--Hb_015934_050 Hb_000107_280 Hb_000107_280 Hb_000357_140--Hb_000107_280 Hb_000020_170 Hb_000020_170 Hb_000357_140--Hb_000020_170 Hb_000109_200 Hb_000109_200 Hb_000357_140--Hb_000109_200 Hb_000363_390 Hb_000363_390 Hb_017908_010--Hb_000363_390 Hb_001105_120 Hb_001105_120 Hb_017908_010--Hb_001105_120 Hb_017908_010--Hb_015934_050 Hb_017908_010--Hb_000107_280 Hb_162472_010 Hb_162472_010 Hb_017908_010--Hb_162472_010 Hb_059554_010--Hb_017908_010 Hb_059554_010--Hb_015934_050 Hb_002045_080 Hb_002045_080 Hb_059554_010--Hb_002045_080 Hb_059554_010--Hb_001105_120 Hb_133279_010 Hb_133279_010 Hb_059554_010--Hb_133279_010 Hb_000815_050 Hb_000815_050 Hb_015934_050--Hb_000815_050 Hb_000140_320 Hb_000140_320 Hb_015934_050--Hb_000140_320 Hb_002740_140 Hb_002740_140 Hb_015934_050--Hb_002740_140 Hb_002311_030 Hb_002311_030 Hb_015934_050--Hb_002311_030 Hb_023582_030 Hb_023582_030 Hb_015934_050--Hb_023582_030 Hb_000742_070 Hb_000742_070 Hb_015934_050--Hb_000742_070 Hb_004313_010 Hb_004313_010 Hb_000107_280--Hb_004313_010 Hb_031012_030 Hb_031012_030 Hb_000107_280--Hb_031012_030 Hb_186458_010 Hb_186458_010 Hb_000107_280--Hb_186458_010 Hb_083963_010 Hb_083963_010 Hb_000107_280--Hb_083963_010 Hb_005353_010 Hb_005353_010 Hb_000107_280--Hb_005353_010 Hb_000107_280--Hb_000109_200 Hb_004686_040 Hb_004686_040 Hb_000020_170--Hb_004686_040 Hb_000020_170--Hb_000109_200 Hb_029883_010 Hb_029883_010 Hb_000020_170--Hb_029883_010 Hb_001568_040 Hb_001568_040 Hb_000020_170--Hb_001568_040 Hb_000134_190 Hb_000134_190 Hb_000020_170--Hb_000134_190 Hb_007317_050 Hb_007317_050 Hb_000020_170--Hb_007317_050 Hb_000109_200--Hb_007317_050 Hb_000109_200--Hb_004686_040 Hb_000109_200--Hb_031012_030 Hb_000109_200--Hb_005353_010 Hb_000109_200--Hb_000134_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.167258 0.392177 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0321435 0 0.0716525

CAGE analysis