Hb_000256_180

Information

Type -
Description -
Location Contig256: 261915-262785
Sequence    

Annotation

kegg
ID rcu:RCOM_0922720
description hypothetical protein
nr
ID XP_012076477.1
description PREDICTED: uncharacterized protein LOC105637589 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KP11
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07120 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26702: 263531-265961
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000256_180 0.0 - - PREDICTED: uncharacterized protein LOC105637589 [Jatropha curcas]
2 Hb_009252_090 0.1211477033 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
3 Hb_004612_020 0.1230183873 - - PREDICTED: tetraspanin-8-like [Populus euphratica]
4 Hb_000592_070 0.1251330405 - - PREDICTED: probable calcium-binding protein CML27 [Jatropha curcas]
5 Hb_002133_010 0.1314581318 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
6 Hb_001660_080 0.133137391 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
7 Hb_002007_070 0.1343666635 - - PREDICTED: serrate RNA effector molecule homolog [Jatropha curcas]
8 Hb_000059_030 0.1351492314 - - PREDICTED: chaperone protein dnaJ 10 [Jatropha curcas]
9 Hb_000069_530 0.1372891199 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
10 Hb_031266_020 0.1379304705 - - PREDICTED: calcineurin B-like protein 9 isoform X1 [Jatropha curcas]
11 Hb_005381_010 0.1403640884 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
12 Hb_003060_150 0.1455513143 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_012400_020 0.1460732316 - - Spotted leaf protein, putative [Ricinus communis]
14 Hb_004551_010 0.1477843676 - - tryptophan synthase beta chain, putative [Ricinus communis]
15 Hb_155896_010 0.1490318959 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
16 Hb_004712_090 0.1498331535 - - Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis]
17 Hb_001369_670 0.1503092582 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
18 Hb_000134_260 0.1518256576 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
19 Hb_002311_160 0.1525857498 transcription factor TF Family: ARR-B sensor histidine kinase, putative [Ricinus communis]
20 Hb_012496_020 0.1537191955 - - receptor serine/threonine kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000256_180 Hb_000256_180 Hb_009252_090 Hb_009252_090 Hb_000256_180--Hb_009252_090 Hb_004612_020 Hb_004612_020 Hb_000256_180--Hb_004612_020 Hb_000592_070 Hb_000592_070 Hb_000256_180--Hb_000592_070 Hb_002133_010 Hb_002133_010 Hb_000256_180--Hb_002133_010 Hb_001660_080 Hb_001660_080 Hb_000256_180--Hb_001660_080 Hb_002007_070 Hb_002007_070 Hb_000256_180--Hb_002007_070 Hb_012400_020 Hb_012400_020 Hb_009252_090--Hb_012400_020 Hb_009252_090--Hb_000592_070 Hb_000069_530 Hb_000069_530 Hb_009252_090--Hb_000069_530 Hb_003060_150 Hb_003060_150 Hb_009252_090--Hb_003060_150 Hb_004551_010 Hb_004551_010 Hb_009252_090--Hb_004551_010 Hb_031266_020 Hb_031266_020 Hb_009252_090--Hb_031266_020 Hb_004899_010 Hb_004899_010 Hb_004612_020--Hb_004899_010 Hb_000164_160 Hb_000164_160 Hb_004612_020--Hb_000164_160 Hb_001310_010 Hb_001310_010 Hb_004612_020--Hb_001310_010 Hb_005381_010 Hb_005381_010 Hb_004612_020--Hb_005381_010 Hb_004612_020--Hb_000069_530 Hb_000627_130 Hb_000627_130 Hb_004612_020--Hb_000627_130 Hb_000592_070--Hb_002133_010 Hb_000592_070--Hb_012400_020 Hb_000592_070--Hb_000069_530 Hb_000592_070--Hb_031266_020 Hb_000592_070--Hb_003060_150 Hb_002133_010--Hb_012400_020 Hb_000997_130 Hb_000997_130 Hb_002133_010--Hb_000997_130 Hb_164577_010 Hb_164577_010 Hb_002133_010--Hb_164577_010 Hb_002133_010--Hb_000069_530 Hb_002133_010--Hb_009252_090 Hb_001660_080--Hb_005381_010 Hb_000836_420 Hb_000836_420 Hb_001660_080--Hb_000836_420 Hb_121540_010 Hb_121540_010 Hb_001660_080--Hb_121540_010 Hb_001660_080--Hb_003060_150 Hb_000035_140 Hb_000035_140 Hb_001660_080--Hb_000035_140 Hb_189208_060 Hb_189208_060 Hb_001660_080--Hb_189208_060 Hb_000680_180 Hb_000680_180 Hb_002007_070--Hb_000680_180 Hb_000162_130 Hb_000162_130 Hb_002007_070--Hb_000162_130 Hb_010126_030 Hb_010126_030 Hb_002007_070--Hb_010126_030 Hb_002007_070--Hb_004612_020 Hb_000984_290 Hb_000984_290 Hb_002007_070--Hb_000984_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.141148 42.5808 70.7417 23.2078 2.04746 0.902954
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.83182 0.392019 0.430068 0.330615 5.4443

CAGE analysis