Hb_000251_060

Information

Type -
Description -
Location Contig251: 86538-87110
Sequence    

Annotation

kegg
ID pop:POPTR_0001s34480g
description hypothetical protein
nr
ID XP_012091912.1
description PREDICTED: uncharacterized protein LOC105649757 isoform X2 [Jatropha curcas]
swissprot
ID Q3B6N5
description Putative pterin-4-alpha-carbinolamine dehydratase OS=Pelodictyon luteolum (strain DSM 273) GN=Plut_0106 PE=3 SV=2
trembl
ID A0A067JEP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21679 PE=4 SV=1
Gene Ontology
ID GO:0008124
description pterin-4-alpha-carbinolamine dehydratase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26228: 86669-87088
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000251_060 0.0 - - PREDICTED: uncharacterized protein LOC105649757 isoform X2 [Jatropha curcas]
2 Hb_005000_040 0.2275962352 - - ACC oxidase ACCO2 [Manihot esculenta]
3 Hb_000086_730 0.2445016299 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1-like [Jatropha curcas]
4 Hb_080225_010 0.244623656 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
5 Hb_152868_010 0.2566225896 rubber biosynthesis Gene Name: REF5 small rubber particle protein [Hevea brasiliensis]
6 Hb_000256_100 0.2628161162 transcription factor TF Family: ERF PPLZ02 family protein [Populus trichocarpa]
7 Hb_001005_180 0.2639281231 - - hypothetical protein Csa_5G464830 [Cucumis sativus]
8 Hb_000614_180 0.2725337639 - - -
9 Hb_001863_280 0.2735012588 - - PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
10 Hb_000471_080 0.2743842158 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
11 Hb_000836_230 0.2751970563 - - Uncharacterized protein TCM_041879 [Theobroma cacao]
12 Hb_000032_580 0.275950969 - - hypothetical protein RCOM_1311780 [Ricinus communis]
13 Hb_002057_010 0.2765329029 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
14 Hb_005396_010 0.2852774688 - - PREDICTED: interleukin enhancer-binding factor 3-B-like [Jatropha curcas]
15 Hb_124625_010 0.2871657757 - - hypothetical protein JCGZ_01142 [Jatropha curcas]
16 Hb_090510_010 0.2883784138 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
17 Hb_000800_060 0.2885983092 - - hypothetical protein POPTR_0008s02870g [Populus trichocarpa]
18 Hb_148435_010 0.2913677552 - - glutathione s-transferase, putative [Ricinus communis]
19 Hb_007545_140 0.2914287574 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
20 Hb_000589_210 0.2931080541 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]

Gene co-expression network

sample Hb_000251_060 Hb_000251_060 Hb_005000_040 Hb_005000_040 Hb_000251_060--Hb_005000_040 Hb_000086_730 Hb_000086_730 Hb_000251_060--Hb_000086_730 Hb_080225_010 Hb_080225_010 Hb_000251_060--Hb_080225_010 Hb_152868_010 Hb_152868_010 Hb_000251_060--Hb_152868_010 Hb_000256_100 Hb_000256_100 Hb_000251_060--Hb_000256_100 Hb_001005_180 Hb_001005_180 Hb_000251_060--Hb_001005_180 Hb_002057_010 Hb_002057_010 Hb_005000_040--Hb_002057_010 Hb_148435_010 Hb_148435_010 Hb_005000_040--Hb_148435_010 Hb_007044_070 Hb_007044_070 Hb_005000_040--Hb_007044_070 Hb_000748_070 Hb_000748_070 Hb_005000_040--Hb_000748_070 Hb_005000_040--Hb_000086_730 Hb_001936_030 Hb_001936_030 Hb_005000_040--Hb_001936_030 Hb_000194_080 Hb_000194_080 Hb_000086_730--Hb_000194_080 Hb_003064_010 Hb_003064_010 Hb_000086_730--Hb_003064_010 Hb_000086_730--Hb_080225_010 Hb_000347_530 Hb_000347_530 Hb_000086_730--Hb_000347_530 Hb_000800_060 Hb_000800_060 Hb_000086_730--Hb_000800_060 Hb_080225_010--Hb_000256_100 Hb_003057_080 Hb_003057_080 Hb_080225_010--Hb_003057_080 Hb_000347_550 Hb_000347_550 Hb_080225_010--Hb_000347_550 Hb_000614_180 Hb_000614_180 Hb_080225_010--Hb_000614_180 Hb_080225_010--Hb_005000_040 Hb_007113_030 Hb_007113_030 Hb_152868_010--Hb_007113_030 Hb_000925_120 Hb_000925_120 Hb_152868_010--Hb_000925_120 Hb_055154_010 Hb_055154_010 Hb_152868_010--Hb_055154_010 Hb_116783_010 Hb_116783_010 Hb_152868_010--Hb_116783_010 Hb_001633_120 Hb_001633_120 Hb_152868_010--Hb_001633_120 Hb_090510_010 Hb_090510_010 Hb_152868_010--Hb_090510_010 Hb_027445_090 Hb_027445_090 Hb_000256_100--Hb_027445_090 Hb_000256_100--Hb_002057_010 Hb_000256_100--Hb_005000_040 Hb_000256_100--Hb_003057_080 Hb_000617_340 Hb_000617_340 Hb_000256_100--Hb_000617_340 Hb_001005_180--Hb_152868_010 Hb_017469_090 Hb_017469_090 Hb_001005_180--Hb_017469_090 Hb_000364_200 Hb_000364_200 Hb_001005_180--Hb_000364_200 Hb_001538_170 Hb_001538_170 Hb_001005_180--Hb_001538_170 Hb_101376_010 Hb_101376_010 Hb_001005_180--Hb_101376_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0694855 0 0.107968 0.182399 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.128593 0 0.812383 0

CAGE analysis