Hb_000188_030

Information

Type -
Description -
Location Contig188: 54169-57643
Sequence    

Annotation

kegg
ID rcu:RCOM_0515640
description carboxylic ester hydrolase, putative
nr
ID XP_002528712.1
description carboxylic ester hydrolase, putative [Ricinus communis]
swissprot
ID Q9LZS7
description GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1
trembl
ID B9SRU3
description Carboxylic ester hydrolase, putative OS=Ricinus communis GN=RCOM_0515640 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at5g03610-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000188_030 0.0 - - carboxylic ester hydrolase, putative [Ricinus communis]
2 Hb_000579_150 0.2657698245 - - PREDICTED: uncharacterized protein LOC104446353 [Eucalyptus grandis]
3 Hb_088084_010 0.2717888381 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
4 Hb_001529_030 0.2757637919 - - hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
5 Hb_002269_010 0.2775153639 - - PREDICTED: WAT1-related protein At4g15540-like [Jatropha curcas]
6 Hb_001703_100 0.2776575446 - - PREDICTED: uncharacterized protein LOC104885230 [Beta vulgaris subsp. vulgaris]
7 Hb_005269_010 0.278814326 - - -
8 Hb_123056_010 0.2806144127 - - -
9 Hb_001250_120 0.2840225687 - - PREDICTED: homeobox protein knotted-1-like 6 [Jatropha curcas]
10 Hb_010531_060 0.2885266881 - - hypothetical protein B456_010G209400, partial [Gossypium raimondii]
11 Hb_007586_010 0.2898637524 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105126050 [Populus euphratica]
12 Hb_001565_120 0.2912130898 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X1 [Jatropha curcas]
13 Hb_012760_180 0.2916371157 - - Basic-leucine zipper transcription factor family protein, putative [Theobroma cacao]
14 Hb_131956_010 0.2965718001 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
15 Hb_001396_170 0.2985101399 - - unnamed protein product [Vitis vinifera]
16 Hb_000574_150 0.2989393267 - - PREDICTED: protein SRG1-like [Jatropha curcas]
17 Hb_023024_010 0.3034590407 - - PREDICTED: uncharacterized protein LOC105767094 [Gossypium raimondii]
18 Hb_001277_140 0.307692715 - - PREDICTED: plasma membrane calcium-transporting ATPase 2-like [Takifugu rubripes]
19 Hb_000894_050 0.3083763159 - - -
20 Hb_096257_010 0.3086866962 - - -

Gene co-expression network

sample Hb_000188_030 Hb_000188_030 Hb_000579_150 Hb_000579_150 Hb_000188_030--Hb_000579_150 Hb_088084_010 Hb_088084_010 Hb_000188_030--Hb_088084_010 Hb_001529_030 Hb_001529_030 Hb_000188_030--Hb_001529_030 Hb_002269_010 Hb_002269_010 Hb_000188_030--Hb_002269_010 Hb_001703_100 Hb_001703_100 Hb_000188_030--Hb_001703_100 Hb_005269_010 Hb_005269_010 Hb_000188_030--Hb_005269_010 Hb_032076_010 Hb_032076_010 Hb_000579_150--Hb_032076_010 Hb_012188_010 Hb_012188_010 Hb_000579_150--Hb_012188_010 Hb_001217_060 Hb_001217_060 Hb_000579_150--Hb_001217_060 Hb_054649_020 Hb_054649_020 Hb_000579_150--Hb_054649_020 Hb_001250_120 Hb_001250_120 Hb_000579_150--Hb_001250_120 Hb_001277_140 Hb_001277_140 Hb_088084_010--Hb_001277_140 Hb_002217_270 Hb_002217_270 Hb_088084_010--Hb_002217_270 Hb_136886_010 Hb_136886_010 Hb_088084_010--Hb_136886_010 Hb_000960_010 Hb_000960_010 Hb_088084_010--Hb_000960_010 Hb_143863_010 Hb_143863_010 Hb_088084_010--Hb_143863_010 Hb_131956_010 Hb_131956_010 Hb_088084_010--Hb_131956_010 Hb_001529_030--Hb_001277_140 Hb_000813_080 Hb_000813_080 Hb_001529_030--Hb_000813_080 Hb_082219_010 Hb_082219_010 Hb_001529_030--Hb_082219_010 Hb_012760_180 Hb_012760_180 Hb_001529_030--Hb_012760_180 Hb_152764_010 Hb_152764_010 Hb_001529_030--Hb_152764_010 Hb_023024_010 Hb_023024_010 Hb_001529_030--Hb_023024_010 Hb_002269_010--Hb_001703_100 Hb_002269_010--Hb_005269_010 Hb_123056_010 Hb_123056_010 Hb_002269_010--Hb_123056_010 Hb_007586_010 Hb_007586_010 Hb_002269_010--Hb_007586_010 Hb_010531_060 Hb_010531_060 Hb_002269_010--Hb_010531_060 Hb_002269_010--Hb_023024_010 Hb_001703_100--Hb_123056_010 Hb_001703_100--Hb_005269_010 Hb_001703_100--Hb_007586_010 Hb_001703_100--Hb_010531_060 Hb_000894_050 Hb_000894_050 Hb_001703_100--Hb_000894_050 Hb_005269_010--Hb_010531_060 Hb_005269_010--Hb_123056_010 Hb_005269_010--Hb_023024_010 Hb_005269_010--Hb_007586_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.849796 1.49143 0 0.0465243 0.0388241 0.150882
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0457734 0 0 0.043354 0.0740671

CAGE analysis