Hb_000116_390

Information

Type -
Description -
Location Contig116: 324352-338768
Sequence    

Annotation

kegg
ID tcc:TCM_000035
description Seven transmembrane MLO family protein
nr
ID AHF52924.1
description Mlo protein [Hevea brasiliensis]
swissprot
ID O22757
description MLO-like protein 8 OS=Arabidopsis thaliana GN=MLO8 PE=1 SV=2
trembl
ID W0G8L7
description MLO-like protein OS=Hevea brasiliensis GN=Mlo9 PE=2 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04878: 324310-324523
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000116_390 0.0 - - Mlo protein [Hevea brasiliensis]
2 Hb_001953_130 0.0735571049 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
3 Hb_000031_130 0.0751944582 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
4 Hb_001376_040 0.0936881216 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
5 Hb_001114_210 0.0946150761 - - PREDICTED: periaxin [Jatropha curcas]
6 Hb_008616_020 0.100678416 - - unnamed protein product [Vitis vinifera]
7 Hb_000185_060 0.1008247069 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
8 Hb_011909_030 0.1070694307 - - hypothetical protein JCGZ_00732 [Jatropha curcas]
9 Hb_012053_030 0.1097877341 - - PREDICTED: GDSL esterase/lipase At5g22810 [Jatropha curcas]
10 Hb_007666_040 0.1107688838 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]
11 Hb_004656_020 0.1124386965 - - EF hand domain-containing protein, variant [Neurospora crassa OR74A]
12 Hb_000535_030 0.1180473373 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
13 Hb_003117_060 0.119207686 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
14 Hb_003253_060 0.1227873975 - - PREDICTED: tropinone reductase-like 1 [Vitis vinifera]
15 Hb_000322_200 0.1235796266 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
16 Hb_000300_570 0.1245501363 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
17 Hb_009083_080 0.1292735478 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003376_340 0.1293516438 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003385_090 0.133634307 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
20 Hb_006418_010 0.1341111264 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000116_390 Hb_000116_390 Hb_001953_130 Hb_001953_130 Hb_000116_390--Hb_001953_130 Hb_000031_130 Hb_000031_130 Hb_000116_390--Hb_000031_130 Hb_001376_040 Hb_001376_040 Hb_000116_390--Hb_001376_040 Hb_001114_210 Hb_001114_210 Hb_000116_390--Hb_001114_210 Hb_008616_020 Hb_008616_020 Hb_000116_390--Hb_008616_020 Hb_000185_060 Hb_000185_060 Hb_000116_390--Hb_000185_060 Hb_011909_030 Hb_011909_030 Hb_001953_130--Hb_011909_030 Hb_003253_060 Hb_003253_060 Hb_001953_130--Hb_003253_060 Hb_001953_130--Hb_000031_130 Hb_106969_010 Hb_106969_010 Hb_001953_130--Hb_106969_010 Hb_012053_030 Hb_012053_030 Hb_001953_130--Hb_012053_030 Hb_000031_130--Hb_001376_040 Hb_000031_130--Hb_001114_210 Hb_004656_020 Hb_004656_020 Hb_000031_130--Hb_004656_020 Hb_000031_130--Hb_008616_020 Hb_000031_130--Hb_000185_060 Hb_001376_040--Hb_008616_020 Hb_001376_040--Hb_001114_210 Hb_032443_030 Hb_032443_030 Hb_001376_040--Hb_032443_030 Hb_001376_040--Hb_004656_020 Hb_005649_120 Hb_005649_120 Hb_001376_040--Hb_005649_120 Hb_049562_010 Hb_049562_010 Hb_001114_210--Hb_049562_010 Hb_001114_210--Hb_005649_120 Hb_001080_040 Hb_001080_040 Hb_001114_210--Hb_001080_040 Hb_008062_020 Hb_008062_020 Hb_001114_210--Hb_008062_020 Hb_008616_020--Hb_000185_060 Hb_002677_010 Hb_002677_010 Hb_008616_020--Hb_002677_010 Hb_032582_010 Hb_032582_010 Hb_008616_020--Hb_032582_010 Hb_008053_070 Hb_008053_070 Hb_008616_020--Hb_008053_070 Hb_000905_030 Hb_000905_030 Hb_008616_020--Hb_000905_030 Hb_000185_060--Hb_002677_010 Hb_000185_060--Hb_032582_010 Hb_000185_060--Hb_008053_070 Hb_181092_010 Hb_181092_010 Hb_000185_060--Hb_181092_010 Hb_000185_060--Hb_001376_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0103052 7.71971 0.291289 0.406657 0.0199679 0.0199018
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.018432 0 5.89036 0

CAGE analysis