Hb_000101_340

Information

Type -
Description -
Location Contig101: 319246-322006
Sequence    

Annotation

kegg
ID rcu:RCOM_1323170
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
nr
ID XP_002519975.1
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Ricinus communis]
swissprot
ID P35493
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2
trembl
ID B9S1V6
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis GN=RCOM_1323170 PE=4 SV=1
Gene Ontology
ID GO:0005737
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00589: 319163-319330
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000101_340 0.0 - - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Ricinus communis]
2 Hb_169492_010 0.0996861008 - - PREDICTED: expansin-like B1 [Jatropha curcas]
3 Hb_011537_130 0.1058156621 - - unnamed protein product [Vitis vinifera]
4 Hb_018202_040 0.1066040909 - - PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
5 Hb_005675_030 0.1099649559 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
6 Hb_002188_150 0.1201201662 - - conserved hypothetical protein [Ricinus communis]
7 Hb_080048_030 0.1217552156 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]
8 Hb_002413_050 0.1219066157 - - hypothetical protein POPTR_0018s06150g [Populus trichocarpa]
9 Hb_001488_160 0.1268763734 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
10 Hb_006718_030 0.1271393759 - - ATPase, F1 complex, gamma subunit protein [Theobroma cacao]
11 Hb_048755_030 0.127150022 - - Periplasmic beta-glucosidase precursor, putative [Ricinus communis]
12 Hb_002620_040 0.1303634726 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
13 Hb_002044_070 0.1311545606 - - Chlorophyll a-b binding protein 3, chloroplastic [Theobroma cacao]
14 Hb_001085_200 0.1315027519 transcription factor TF Family: ARID PREDICTED: high mobility group B protein 15 [Jatropha curcas]
15 Hb_001579_050 0.1326834672 - - alcohol dehydrogenase, putative [Ricinus communis]
16 Hb_054865_040 0.1336602149 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
17 Hb_018487_040 0.1339934302 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
18 Hb_002534_090 0.1341133444 - - geranylgeranyl reductase [Hevea brasiliensis]
19 Hb_003358_030 0.1348536126 - - ankyrin-kinase, putative [Ricinus communis]
20 Hb_000627_110 0.1359893907 - - cellulose synthase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000101_340 Hb_000101_340 Hb_169492_010 Hb_169492_010 Hb_000101_340--Hb_169492_010 Hb_011537_130 Hb_011537_130 Hb_000101_340--Hb_011537_130 Hb_018202_040 Hb_018202_040 Hb_000101_340--Hb_018202_040 Hb_005675_030 Hb_005675_030 Hb_000101_340--Hb_005675_030 Hb_002188_150 Hb_002188_150 Hb_000101_340--Hb_002188_150 Hb_080048_030 Hb_080048_030 Hb_000101_340--Hb_080048_030 Hb_169492_010--Hb_080048_030 Hb_169492_010--Hb_018202_040 Hb_169492_010--Hb_005675_030 Hb_018487_040 Hb_018487_040 Hb_169492_010--Hb_018487_040 Hb_169492_010--Hb_011537_130 Hb_001951_050 Hb_001951_050 Hb_169492_010--Hb_001951_050 Hb_011537_130--Hb_005675_030 Hb_011537_130--Hb_018202_040 Hb_002413_050 Hb_002413_050 Hb_011537_130--Hb_002413_050 Hb_002534_090 Hb_002534_090 Hb_011537_130--Hb_002534_090 Hb_002044_070 Hb_002044_070 Hb_011537_130--Hb_002044_070 Hb_018202_040--Hb_005675_030 Hb_018202_040--Hb_002413_050 Hb_010021_040 Hb_010021_040 Hb_018202_040--Hb_010021_040 Hb_000883_080 Hb_000883_080 Hb_018202_040--Hb_000883_080 Hb_001488_160 Hb_001488_160 Hb_005675_030--Hb_001488_160 Hb_005675_030--Hb_080048_030 Hb_005675_030--Hb_018487_040 Hb_003622_050 Hb_003622_050 Hb_002188_150--Hb_003622_050 Hb_002188_150--Hb_169492_010 Hb_001053_050 Hb_001053_050 Hb_002188_150--Hb_001053_050 Hb_001775_010 Hb_001775_010 Hb_002188_150--Hb_001775_010 Hb_077976_010 Hb_077976_010 Hb_002188_150--Hb_077976_010 Hb_001146_030 Hb_001146_030 Hb_002188_150--Hb_001146_030 Hb_001104_070 Hb_001104_070 Hb_080048_030--Hb_001104_070 Hb_080048_030--Hb_018487_040 Hb_002675_220 Hb_002675_220 Hb_080048_030--Hb_002675_220 Hb_189208_080 Hb_189208_080 Hb_080048_030--Hb_189208_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.089708 0.115633 0.616821 1.01106 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.149024 4.39979

CAGE analysis