Hb_000027_280

Information

Type -
Description -
Location Contig27: 419673-420179
Sequence    

Annotation

kegg
ID pop:POPTR_0008s12170g
description POPTRDRAFT_564546; hypothetical protein
nr
ID XP_012082121.1
description PREDICTED: uncharacterized protein LOC105642051 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KC69
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18360 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000027_280 0.0 - - PREDICTED: uncharacterized protein LOC105642051 [Jatropha curcas]
2 Hb_163989_010 0.1683446093 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002641_090 0.1825316771 - - PREDICTED: uncharacterized protein LOC105643559 [Jatropha curcas]
4 Hb_000157_020 0.1843274894 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000890_120 0.1855891685 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
6 Hb_009079_040 0.1881900026 - - BnaA02g30070D [Brassica napus]
7 Hb_005389_030 0.1921642802 - - hypothetical protein VITISV_023348 [Vitis vinifera]
8 Hb_000028_450 0.1939582508 - - PREDICTED: monoglyceride lipase-like [Jatropha curcas]
9 Hb_005357_040 0.1940355764 - - gibberellin 20-oxidase, putative [Ricinus communis]
10 Hb_002217_400 0.1954949182 - - polynucleotidyl transferase, ribonuclease H-like protein [Arabidopsis thaliana]
11 Hb_003082_090 0.1963002319 - - hypothetical protein POPTR_0013s099451g, partial [Populus trichocarpa]
12 Hb_100953_010 0.1965841256 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
13 Hb_138585_070 0.1982305612 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001369_510 0.1985218988 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
15 Hb_007138_010 0.1990517942 - - PREDICTED: putative laccase-9 [Jatropha curcas]
16 Hb_000617_160 0.1993511964 - - -
17 Hb_165110_010 0.2029623078 - - PREDICTED: kunitz-type elastase inhibitor BrEI-like [Jatropha curcas]
18 Hb_000732_200 0.203399187 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000320_240 0.2042940781 - - multicopper oxidase, putative [Ricinus communis]
20 Hb_001195_670 0.2103568085 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_000027_280 Hb_000027_280 Hb_163989_010 Hb_163989_010 Hb_000027_280--Hb_163989_010 Hb_002641_090 Hb_002641_090 Hb_000027_280--Hb_002641_090 Hb_000157_020 Hb_000157_020 Hb_000027_280--Hb_000157_020 Hb_000890_120 Hb_000890_120 Hb_000027_280--Hb_000890_120 Hb_009079_040 Hb_009079_040 Hb_000027_280--Hb_009079_040 Hb_005389_030 Hb_005389_030 Hb_000027_280--Hb_005389_030 Hb_163989_010--Hb_002641_090 Hb_163989_010--Hb_005389_030 Hb_000028_450 Hb_000028_450 Hb_163989_010--Hb_000028_450 Hb_005357_040 Hb_005357_040 Hb_163989_010--Hb_005357_040 Hb_100953_010 Hb_100953_010 Hb_163989_010--Hb_100953_010 Hb_003082_090 Hb_003082_090 Hb_163989_010--Hb_003082_090 Hb_002641_090--Hb_005389_030 Hb_001369_510 Hb_001369_510 Hb_002641_090--Hb_001369_510 Hb_002641_090--Hb_100953_010 Hb_002641_090--Hb_003082_090 Hb_002641_090--Hb_000028_450 Hb_000506_050 Hb_000506_050 Hb_000157_020--Hb_000506_050 Hb_000157_020--Hb_000890_120 Hb_000339_050 Hb_000339_050 Hb_000157_020--Hb_000339_050 Hb_000086_510 Hb_000086_510 Hb_000157_020--Hb_000086_510 Hb_165110_010 Hb_165110_010 Hb_000157_020--Hb_165110_010 Hb_085829_010 Hb_085829_010 Hb_000157_020--Hb_085829_010 Hb_000890_120--Hb_000086_510 Hb_000890_120--Hb_085829_010 Hb_002900_180 Hb_002900_180 Hb_000890_120--Hb_002900_180 Hb_000017_250 Hb_000017_250 Hb_000890_120--Hb_000017_250 Hb_004705_060 Hb_004705_060 Hb_000890_120--Hb_004705_060 Hb_000011_310 Hb_000011_310 Hb_009079_040--Hb_000011_310 Hb_009079_040--Hb_002900_180 Hb_004147_070 Hb_004147_070 Hb_009079_040--Hb_004147_070 Hb_003055_090 Hb_003055_090 Hb_009079_040--Hb_003055_090 Hb_001902_200 Hb_001902_200 Hb_009079_040--Hb_001902_200 Hb_005389_030--Hb_005357_040 Hb_005389_030--Hb_000028_450 Hb_005389_030--Hb_100953_010 Hb_002217_400 Hb_002217_400 Hb_005389_030--Hb_002217_400 Hb_007138_010 Hb_007138_010 Hb_005389_030--Hb_007138_010 Hb_138585_070 Hb_138585_070 Hb_005389_030--Hb_138585_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.096112 2.34614 6.60344 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.393588 0.103072 0.175108 0.984261 0

CAGE analysis