Hb_189034_010

Information

Type -
Description -
Location Contig189034: 984-1358
Sequence    

Annotation

kegg
ID rcu:RCOM_1494400
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.13)
nr
ID XP_002516046.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9LDS6
description Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=3 SV=1
trembl
ID B9RQM7
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1494400 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_189034_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000137_030 0.078606461 - - PREDICTED: cysteine-rich repeat secretory protein 55-like [Citrus sinensis]
3 Hb_002431_090 0.0880456846 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002325_050 0.0933440617 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
5 Hb_005784_020 0.11416713 - - Protein MKS1, putative [Ricinus communis]
6 Hb_183209_020 0.1144974149 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
7 Hb_050898_010 0.1164318747 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
8 Hb_131662_010 0.1181629836 - - Insulin-degrading enzyme, putative [Ricinus communis]
9 Hb_004166_020 0.1204141816 - - -
10 Hb_001013_080 0.1230479823 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
11 Hb_000111_190 0.1250580965 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
12 Hb_174101_010 0.1259021857 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
13 Hb_103541_010 0.1282428101 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
14 Hb_008725_020 0.1312653646 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
15 Hb_001913_030 0.1320255977 - - ankyrin repeat protein [Bruguiera gymnorhiza]
16 Hb_001248_170 0.1329412499 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
17 Hb_008092_020 0.1334471907 - - transcription factor, putative [Ricinus communis]
18 Hb_010573_040 0.1348262493 - - PREDICTED: zinc-metallopeptidase, peroxisomal isoform X2 [Populus euphratica]
19 Hb_000589_330 0.1367720111 - - kinase, putative [Ricinus communis]
20 Hb_003849_200 0.1375085189 - - PREDICTED: BTB/POZ domain-containing protein At1g67900-like isoform X1 [Citrus sinensis]

Gene co-expression network

sample Hb_189034_010 Hb_189034_010 Hb_000137_030 Hb_000137_030 Hb_189034_010--Hb_000137_030 Hb_002431_090 Hb_002431_090 Hb_189034_010--Hb_002431_090 Hb_002325_050 Hb_002325_050 Hb_189034_010--Hb_002325_050 Hb_005784_020 Hb_005784_020 Hb_189034_010--Hb_005784_020 Hb_183209_020 Hb_183209_020 Hb_189034_010--Hb_183209_020 Hb_050898_010 Hb_050898_010 Hb_189034_010--Hb_050898_010 Hb_000723_060 Hb_000723_060 Hb_000137_030--Hb_000723_060 Hb_000137_030--Hb_050898_010 Hb_005892_010 Hb_005892_010 Hb_000137_030--Hb_005892_010 Hb_001587_220 Hb_001587_220 Hb_000137_030--Hb_001587_220 Hb_000137_030--Hb_183209_020 Hb_002477_080 Hb_002477_080 Hb_002431_090--Hb_002477_080 Hb_000816_050 Hb_000816_050 Hb_002431_090--Hb_000816_050 Hb_003835_030 Hb_003835_030 Hb_002431_090--Hb_003835_030 Hb_000477_010 Hb_000477_010 Hb_002431_090--Hb_000477_010 Hb_008092_020 Hb_008092_020 Hb_002431_090--Hb_008092_020 Hb_008725_020 Hb_008725_020 Hb_002325_050--Hb_008725_020 Hb_004659_100 Hb_004659_100 Hb_002325_050--Hb_004659_100 Hb_001198_180 Hb_001198_180 Hb_002325_050--Hb_001198_180 Hb_010642_010 Hb_010642_010 Hb_002325_050--Hb_010642_010 Hb_001562_030 Hb_001562_030 Hb_002325_050--Hb_001562_030 Hb_005784_020--Hb_008092_020 Hb_002276_100 Hb_002276_100 Hb_005784_020--Hb_002276_100 Hb_000028_460 Hb_000028_460 Hb_005784_020--Hb_000028_460 Hb_000976_340 Hb_000976_340 Hb_005784_020--Hb_000976_340 Hb_004544_090 Hb_004544_090 Hb_005784_020--Hb_004544_090 Hb_000497_100 Hb_000497_100 Hb_005784_020--Hb_000497_100 Hb_183209_020--Hb_050898_010 Hb_103541_010 Hb_103541_010 Hb_183209_020--Hb_103541_010 Hb_000002_230 Hb_000002_230 Hb_183209_020--Hb_000002_230 Hb_000203_150 Hb_000203_150 Hb_183209_020--Hb_000203_150 Hb_050898_010--Hb_005892_010 Hb_000922_290 Hb_000922_290 Hb_050898_010--Hb_000922_290 Hb_050898_010--Hb_103541_010 Hb_050898_010--Hb_000816_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 9.09184 3.19739 9.28406 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.09579 2.13717

CAGE analysis