Hb_185754_010

Information

Type -
Description -
Location Contig185754: 2-793
Sequence    

Annotation

kegg
ID rcu:RCOM_1500640
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002510965.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID B9R9U0
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1500640 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185754_010 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_088117_010 0.126420584 - - receptor protein kinase, putative [Ricinus communis]
3 Hb_000172_630 0.2474251069 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
4 Hb_026186_010 0.2497071854 - - hypothetical protein JCGZ_06344 [Jatropha curcas]
5 Hb_001016_020 0.2615498399 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003023_080 0.2634108701 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_139569_010 0.2667798432 - - hypothetical protein JCGZ_24635 [Jatropha curcas]
8 Hb_001231_040 0.2681822981 - - hypothetical protein POPTR_0006s06470g [Populus trichocarpa]
9 Hb_000000_280 0.275113947 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005227_050 0.2771744301 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001369_290 0.287569343 - - receptor protein kinase, putative [Ricinus communis]
12 Hb_008725_190 0.2893625475 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 5-like [Jatropha curcas]
13 Hb_091889_020 0.2924257345 - - -
14 Hb_001221_520 0.2954576363 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000111_200 0.2958223503 - - PREDICTED: CYSTM1 family protein A-like [Cucumis melo]
16 Hb_004453_190 0.2962079415 - - -
17 Hb_001999_240 0.2987855679 - - PREDICTED: josephin-like protein [Populus euphratica]
18 Hb_023768_020 0.3006160942 - - conserved hypothetical protein [Ricinus communis]
19 Hb_007304_100 0.3020529277 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Jatropha curcas]
20 Hb_009620_010 0.3044614316 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_185754_010 Hb_185754_010 Hb_088117_010 Hb_088117_010 Hb_185754_010--Hb_088117_010 Hb_000172_630 Hb_000172_630 Hb_185754_010--Hb_000172_630 Hb_026186_010 Hb_026186_010 Hb_185754_010--Hb_026186_010 Hb_001016_020 Hb_001016_020 Hb_185754_010--Hb_001016_020 Hb_003023_080 Hb_003023_080 Hb_185754_010--Hb_003023_080 Hb_139569_010 Hb_139569_010 Hb_185754_010--Hb_139569_010 Hb_009252_120 Hb_009252_120 Hb_088117_010--Hb_009252_120 Hb_088117_010--Hb_000172_630 Hb_088117_010--Hb_026186_010 Hb_006816_160 Hb_006816_160 Hb_088117_010--Hb_006816_160 Hb_008725_190 Hb_008725_190 Hb_088117_010--Hb_008725_190 Hb_000172_630--Hb_026186_010 Hb_005097_010 Hb_005097_010 Hb_000172_630--Hb_005097_010 Hb_001369_290 Hb_001369_290 Hb_000172_630--Hb_001369_290 Hb_000172_630--Hb_001016_020 Hb_026186_010--Hb_001369_290 Hb_026186_010--Hb_139569_010 Hb_004453_190 Hb_004453_190 Hb_026186_010--Hb_004453_190 Hb_005170_020 Hb_005170_020 Hb_001016_020--Hb_005170_020 Hb_000111_200 Hb_000111_200 Hb_001016_020--Hb_000111_200 Hb_023768_020 Hb_023768_020 Hb_001016_020--Hb_023768_020 Hb_001016_020--Hb_004453_190 Hb_108670_010 Hb_108670_010 Hb_001016_020--Hb_108670_010 Hb_001404_030 Hb_001404_030 Hb_001016_020--Hb_001404_030 Hb_125884_010 Hb_125884_010 Hb_003023_080--Hb_125884_010 Hb_019026_030 Hb_019026_030 Hb_003023_080--Hb_019026_030 Hb_005976_040 Hb_005976_040 Hb_003023_080--Hb_005976_040 Hb_004143_050 Hb_004143_050 Hb_003023_080--Hb_004143_050 Hb_032920_040 Hb_032920_040 Hb_003023_080--Hb_032920_040 Hb_000805_150 Hb_000805_150 Hb_003023_080--Hb_000805_150 Hb_139569_010--Hb_004453_190 Hb_139569_010--Hb_001369_290 Hb_000216_010 Hb_000216_010 Hb_139569_010--Hb_000216_010 Hb_139569_010--Hb_088117_010 Hb_139569_010--Hb_001016_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.62843 0.135646 1.92497 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.645326 0.29156 0.0653238 0

CAGE analysis