Hb_164146_010

Information

Type -
Description -
Location Contig164146: 1002-1896
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005737
description metal ion binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164146_010 0.0 - - -
2 Hb_000127_220 0.1425093409 - - PREDICTED: uncharacterized protein LOC105111046 [Populus euphratica]
3 Hb_000836_310 0.1541482693 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 30 [Jatropha curcas]
4 Hb_101437_010 0.1564401774 - - PREDICTED: protein P21-like [Jatropha curcas]
5 Hb_000175_250 0.175062955 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
6 Hb_000959_240 0.1762690548 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_004924_030 0.1787408196 - - -
8 Hb_012496_010 0.1814093645 - - kinase, putative [Ricinus communis]
9 Hb_116352_010 0.1814315975 - - kinase, putative [Ricinus communis]
10 Hb_164146_020 0.1819634297 - - metal ion binding protein, putative [Ricinus communis]
11 Hb_004032_220 0.1827484024 - - Calmodulin, putative [Ricinus communis]
12 Hb_000340_060 0.1836007799 - - conserved hypothetical protein [Ricinus communis]
13 Hb_020367_010 0.1840466682 - - hypothetical protein PRUPE_ppa004271mg [Prunus persica]
14 Hb_006907_020 0.1850144727 - - 1-amino-cyclopropane-1-carboxylic acid oxidase 3 [Manihot esculenta]
15 Hb_025248_030 0.1884282205 - - hypothetical protein JCGZ_09377 [Jatropha curcas]
16 Hb_002232_330 0.1884658461 - - -
17 Hb_000522_100 0.1884715612 - - PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Nelumbo nucifera]
18 Hb_005171_030 0.1884910921 - - hypothetical protein EUGRSUZ_H02434 [Eucalyptus grandis]
19 Hb_129319_010 0.1884976437 - - PREDICTED: uncharacterized protein LOC104115096 [Nicotiana tomentosiformis]
20 Hb_005417_020 0.1885038344 - - -

Gene co-expression network

sample Hb_164146_010 Hb_164146_010 Hb_000127_220 Hb_000127_220 Hb_164146_010--Hb_000127_220 Hb_000836_310 Hb_000836_310 Hb_164146_010--Hb_000836_310 Hb_101437_010 Hb_101437_010 Hb_164146_010--Hb_101437_010 Hb_000175_250 Hb_000175_250 Hb_164146_010--Hb_000175_250 Hb_000959_240 Hb_000959_240 Hb_164146_010--Hb_000959_240 Hb_004924_030 Hb_004924_030 Hb_164146_010--Hb_004924_030 Hb_000127_220--Hb_000836_310 Hb_012496_010 Hb_012496_010 Hb_000127_220--Hb_012496_010 Hb_000422_050 Hb_000422_050 Hb_000127_220--Hb_000422_050 Hb_000340_060 Hb_000340_060 Hb_000127_220--Hb_000340_060 Hb_004032_220 Hb_004032_220 Hb_000127_220--Hb_004032_220 Hb_001257_040 Hb_001257_040 Hb_000127_220--Hb_001257_040 Hb_000836_310--Hb_004032_220 Hb_106810_010 Hb_106810_010 Hb_000836_310--Hb_106810_010 Hb_000836_310--Hb_012496_010 Hb_000836_310--Hb_000340_060 Hb_000032_150 Hb_000032_150 Hb_000836_310--Hb_000032_150 Hb_008725_220 Hb_008725_220 Hb_101437_010--Hb_008725_220 Hb_101437_010--Hb_000959_240 Hb_001515_040 Hb_001515_040 Hb_101437_010--Hb_001515_040 Hb_000025_490 Hb_000025_490 Hb_101437_010--Hb_000025_490 Hb_020367_010 Hb_020367_010 Hb_101437_010--Hb_020367_010 Hb_000433_050 Hb_000433_050 Hb_101437_010--Hb_000433_050 Hb_039650_030 Hb_039650_030 Hb_000175_250--Hb_039650_030 Hb_000175_250--Hb_004924_030 Hb_028841_020 Hb_028841_020 Hb_000175_250--Hb_028841_020 Hb_007328_010 Hb_007328_010 Hb_000175_250--Hb_007328_010 Hb_000175_250--Hb_012496_010 Hb_141990_050 Hb_141990_050 Hb_000175_250--Hb_141990_050 Hb_000959_240--Hb_008725_220 Hb_007858_020 Hb_007858_020 Hb_000959_240--Hb_007858_020 Hb_005054_330 Hb_005054_330 Hb_000959_240--Hb_005054_330 Hb_167186_010 Hb_167186_010 Hb_000959_240--Hb_167186_010 Hb_000959_240--Hb_000025_490 Hb_004924_030--Hb_039650_030 Hb_005545_080 Hb_005545_080 Hb_004924_030--Hb_005545_080 Hb_000059_160 Hb_000059_160 Hb_004924_030--Hb_000059_160 Hb_000465_100 Hb_000465_100 Hb_004924_030--Hb_000465_100 Hb_006873_030 Hb_006873_030 Hb_004924_030--Hb_006873_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.074079 76.9381 35.4613 1.06816 0.0888025 0.338855
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.106659 0.192868 0.172708 6.3137

CAGE analysis