Hb_160837_010

Information

Type -
Description -
Location Contig160837: 8860-10363
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_160837_010 0.0 - - -
2 Hb_000635_010 0.1873909573 - - -
3 Hb_030370_030 0.1901032036 - - putative wall-associated kinase family protein [Populus trichocarpa]
4 Hb_178968_160 0.2056474018 - - -
5 Hb_003043_120 0.2141531805 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000144_110 0.2167410107 - - hypothetical protein CICLE_v10013189mg [Citrus clementina]
7 Hb_002007_050 0.2183625013 - - PREDICTED: putative protease Do-like 14 [Jatropha curcas]
8 Hb_001102_250 0.2212437804 - - PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Jatropha curcas]
9 Hb_000815_270 0.2224222186 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000059_350 0.2256488022 - - glutamate dehydrogenase, putative [Ricinus communis]
11 Hb_001279_130 0.2261099855 - - hypothetical protein L484_017676 [Morus notabilis]
12 Hb_010594_030 0.2294301575 - - -
13 Hb_167467_010 0.2303244011 - - hypothetical protein CICLE_v10029508mg [Citrus clementina]
14 Hb_000805_130 0.2316675787 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000803_050 0.2322204859 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
16 Hb_000954_020 0.235266778 - - -
17 Hb_000111_280 0.2353428552 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
18 Hb_000641_040 0.2357883747 - - PREDICTED: condensin complex subunit 1 isoform X1 [Jatropha curcas]
19 Hb_124567_020 0.236481056 - - PREDICTED: pentatricopeptide repeat-containing protein At2g21090 [Jatropha curcas]
20 Hb_000188_130 0.238135616 - - PREDICTED: uncharacterized protein LOC102628744 [Citrus sinensis]

Gene co-expression network

sample Hb_160837_010 Hb_160837_010 Hb_000635_010 Hb_000635_010 Hb_160837_010--Hb_000635_010 Hb_030370_030 Hb_030370_030 Hb_160837_010--Hb_030370_030 Hb_178968_160 Hb_178968_160 Hb_160837_010--Hb_178968_160 Hb_003043_120 Hb_003043_120 Hb_160837_010--Hb_003043_120 Hb_000144_110 Hb_000144_110 Hb_160837_010--Hb_000144_110 Hb_002007_050 Hb_002007_050 Hb_160837_010--Hb_002007_050 Hb_145084_010 Hb_145084_010 Hb_000635_010--Hb_145084_010 Hb_000270_620 Hb_000270_620 Hb_000635_010--Hb_000270_620 Hb_002151_050 Hb_002151_050 Hb_000635_010--Hb_002151_050 Hb_012239_100 Hb_012239_100 Hb_000635_010--Hb_012239_100 Hb_000098_220 Hb_000098_220 Hb_000635_010--Hb_000098_220 Hb_010589_110 Hb_010589_110 Hb_030370_030--Hb_010589_110 Hb_000544_110 Hb_000544_110 Hb_030370_030--Hb_000544_110 Hb_000803_050 Hb_000803_050 Hb_030370_030--Hb_000803_050 Hb_001102_250 Hb_001102_250 Hb_030370_030--Hb_001102_250 Hb_005908_040 Hb_005908_040 Hb_030370_030--Hb_005908_040 Hb_124567_020 Hb_124567_020 Hb_178968_160--Hb_124567_020 Hb_000815_270 Hb_000815_270 Hb_178968_160--Hb_000815_270 Hb_001158_230 Hb_001158_230 Hb_178968_160--Hb_001158_230 Hb_000696_220 Hb_000696_220 Hb_178968_160--Hb_000696_220 Hb_000933_160 Hb_000933_160 Hb_178968_160--Hb_000933_160 Hb_005590_020 Hb_005590_020 Hb_178968_160--Hb_005590_020 Hb_011245_020 Hb_011245_020 Hb_003043_120--Hb_011245_020 Hb_017862_010 Hb_017862_010 Hb_003043_120--Hb_017862_010 Hb_003043_120--Hb_001102_250 Hb_006831_030 Hb_006831_030 Hb_003043_120--Hb_006831_030 Hb_034585_050 Hb_034585_050 Hb_003043_120--Hb_034585_050 Hb_000069_100 Hb_000069_100 Hb_003043_120--Hb_000069_100 Hb_000144_110--Hb_000815_270 Hb_011609_180 Hb_011609_180 Hb_000144_110--Hb_011609_180 Hb_001045_080 Hb_001045_080 Hb_000144_110--Hb_001045_080 Hb_009851_100 Hb_009851_100 Hb_000144_110--Hb_009851_100 Hb_000025_600 Hb_000025_600 Hb_000144_110--Hb_000025_600 Hb_009252_130 Hb_009252_130 Hb_000144_110--Hb_009252_130 Hb_148930_010 Hb_148930_010 Hb_002007_050--Hb_148930_010 Hb_003376_130 Hb_003376_130 Hb_002007_050--Hb_003376_130 Hb_003086_100 Hb_003086_100 Hb_002007_050--Hb_003086_100 Hb_012265_010 Hb_012265_010 Hb_002007_050--Hb_012265_010 Hb_005701_020 Hb_005701_020 Hb_002007_050--Hb_005701_020 Hb_001123_120 Hb_001123_120 Hb_002007_050--Hb_001123_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.301738 0 0.218603 0 0.0662156 0.16288
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.497081 0.78088 0.428588 0.219454 0

CAGE analysis