Hb_000803_050

Information

Type -
Description -
Location Contig803: 113621-117207
Sequence    

Annotation

kegg
ID rcu:RCOM_1578520
description hypothetical protein
nr
ID XP_012090026.1
description PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQ40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25941 PE=4 SV=1
Gene Ontology
ID GO:0005739
description system c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000803_050 0.0 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
2 Hb_026428_010 0.1475656266 - - copper transport protein ATOX1 [Hevea brasiliensis]
3 Hb_000235_010 0.1496836742 - - PREDICTED: serine carboxypeptidase-like 18 [Jatropha curcas]
4 Hb_003050_070 0.1504528753 - - conserved hypothetical protein [Ricinus communis]
5 Hb_011004_010 0.1507550836 - - Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]
6 Hb_001671_060 0.1563503657 - - fad NAD binding oxidoreductases, putative [Ricinus communis]
7 Hb_000575_020 0.1588316972 - - PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Jatropha curcas]
8 Hb_003371_100 0.1731427498 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
9 Hb_011671_400 0.1746269099 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]
10 Hb_000175_610 0.1748508193 transcription factor TF Family: Tify PREDICTED: protein TIFY 8 isoform X3 [Jatropha curcas]
11 Hb_001157_220 0.1749172907 - - conserved hypothetical protein [Ricinus communis]
12 Hb_007120_070 0.1780914904 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
13 Hb_001507_070 0.1788807457 - - conserved hypothetical protein [Ricinus communis]
14 Hb_089100_020 0.1797154425 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
15 Hb_000188_130 0.1807545153 - - PREDICTED: uncharacterized protein LOC102628744 [Citrus sinensis]
16 Hb_000836_500 0.185007512 - - Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis]
17 Hb_000742_270 0.1856356459 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
18 Hb_003020_310 0.1857856633 - - glycosyltransferase, putative [Ricinus communis]
19 Hb_000714_010 0.1865045198 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
20 Hb_000107_070 0.1867589352 - - PREDICTED: uncharacterized protein LOC105641007 [Jatropha curcas]

Gene co-expression network

sample Hb_000803_050 Hb_000803_050 Hb_026428_010 Hb_026428_010 Hb_000803_050--Hb_026428_010 Hb_000235_010 Hb_000235_010 Hb_000803_050--Hb_000235_010 Hb_003050_070 Hb_003050_070 Hb_000803_050--Hb_003050_070 Hb_011004_010 Hb_011004_010 Hb_000803_050--Hb_011004_010 Hb_001671_060 Hb_001671_060 Hb_000803_050--Hb_001671_060 Hb_000575_020 Hb_000575_020 Hb_000803_050--Hb_000575_020 Hb_001035_040 Hb_001035_040 Hb_026428_010--Hb_001035_040 Hb_007120_070 Hb_007120_070 Hb_026428_010--Hb_007120_070 Hb_000175_610 Hb_000175_610 Hb_026428_010--Hb_000175_610 Hb_000188_130 Hb_000188_130 Hb_026428_010--Hb_000188_130 Hb_000107_070 Hb_000107_070 Hb_026428_010--Hb_000107_070 Hb_000235_010--Hb_003050_070 Hb_001507_070 Hb_001507_070 Hb_000235_010--Hb_001507_070 Hb_000453_300 Hb_000453_300 Hb_000235_010--Hb_000453_300 Hb_003211_050 Hb_003211_050 Hb_000235_010--Hb_003211_050 Hb_000235_010--Hb_000175_610 Hb_000714_010 Hb_000714_010 Hb_003050_070--Hb_000714_010 Hb_003050_070--Hb_003211_050 Hb_000567_280 Hb_000567_280 Hb_003050_070--Hb_000567_280 Hb_104010_010 Hb_104010_010 Hb_003050_070--Hb_104010_010 Hb_010166_020 Hb_010166_020 Hb_003050_070--Hb_010166_020 Hb_149683_010 Hb_149683_010 Hb_003050_070--Hb_149683_010 Hb_000032_040 Hb_000032_040 Hb_011004_010--Hb_000032_040 Hb_011004_010--Hb_001507_070 Hb_011004_010--Hb_000575_020 Hb_000742_270 Hb_000742_270 Hb_011004_010--Hb_000742_270 Hb_003371_100 Hb_003371_100 Hb_011004_010--Hb_003371_100 Hb_011004_010--Hb_000175_610 Hb_000250_010 Hb_000250_010 Hb_001671_060--Hb_000250_010 Hb_001671_060--Hb_000107_070 Hb_001671_060--Hb_007120_070 Hb_001157_220 Hb_001157_220 Hb_001671_060--Hb_001157_220 Hb_000178_110 Hb_000178_110 Hb_001671_060--Hb_000178_110 Hb_004108_090 Hb_004108_090 Hb_000575_020--Hb_004108_090 Hb_000575_020--Hb_000032_040 Hb_000575_020--Hb_001507_070 Hb_000575_020--Hb_000742_270 Hb_000012_130 Hb_000012_130 Hb_000575_020--Hb_000012_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.63604 0.0796366 0.517005 0.026969 0.297427 0.251554
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.41286 3.07195 2.11782 0.307469 0.127374

CAGE analysis