Hb_154443_010

Information

Type -
Description -
Location Contig154443: 1268-2392
Sequence    

Annotation

kegg
ID cmo:103503101
description uncharacterized LOC103503101
nr
ID XP_012071389.1
description PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A0B0MQD4
description Phosphate import ATP-binding PstB 2 OS=Gossypium arboreum GN=F383_30012 PE=4 SV=1
Gene Ontology
ID GO:0016740
description hexaprenyldihydroxybenzoate mitochondrial -like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154443_010 0.0 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
2 Hb_000617_290 0.1456338998 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001638_210 0.1976220488 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006018_030 0.2062923698 - - PREDICTED: uncharacterized protein LOC105108875 isoform X1 [Populus euphratica]
5 Hb_048937_030 0.2333721925 - - hypothetical protein RCOM_0231790 [Ricinus communis]
6 Hb_002099_050 0.2441224122 - - conserved hypothetical protein [Ricinus communis]
7 Hb_020096_020 0.250685891 - - -
8 Hb_033152_050 0.2636920775 - - hypothetical protein JCGZ_04890 [Jatropha curcas]
9 Hb_000249_090 0.2643229279 - - PREDICTED: triacylglycerol lipase SDP1 [Jatropha curcas]
10 Hb_185830_010 0.2646276335 - - PREDICTED: pathogenesis-related protein PR-1 [Jatropha curcas]
11 Hb_000614_100 0.2718697305 - - 3-oxoacyl-[acyl-carrier-protein] reductase [Populus trichocarpa]
12 Hb_000699_120 0.2727807833 - - DNA-binding family protein [Populus trichocarpa]
13 Hb_075449_050 0.2748047269 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
14 Hb_008864_060 0.2754614855 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]
15 Hb_001741_040 0.2765346746 rubber biosynthesis Gene Name: REF3 REF-like stress related protein 1 [Hevea brasiliensis]
16 Hb_005616_030 0.2833095026 - - PREDICTED: wall-associated receptor kinase-like 1 [Eucalyptus grandis]
17 Hb_000250_010 0.2875515059 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
18 Hb_004705_030 0.2904676725 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003052_040 0.2913656222 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007590_060 0.2920008429 - - -

Gene co-expression network

sample Hb_154443_010 Hb_154443_010 Hb_000617_290 Hb_000617_290 Hb_154443_010--Hb_000617_290 Hb_001638_210 Hb_001638_210 Hb_154443_010--Hb_001638_210 Hb_006018_030 Hb_006018_030 Hb_154443_010--Hb_006018_030 Hb_048937_030 Hb_048937_030 Hb_154443_010--Hb_048937_030 Hb_002099_050 Hb_002099_050 Hb_154443_010--Hb_002099_050 Hb_020096_020 Hb_020096_020 Hb_154443_010--Hb_020096_020 Hb_008864_060 Hb_008864_060 Hb_000617_290--Hb_008864_060 Hb_005616_030 Hb_005616_030 Hb_000617_290--Hb_005616_030 Hb_000617_290--Hb_002099_050 Hb_000614_100 Hb_000614_100 Hb_000617_290--Hb_000614_100 Hb_000617_290--Hb_048937_030 Hb_000249_090 Hb_000249_090 Hb_001638_210--Hb_000249_090 Hb_001638_210--Hb_006018_030 Hb_001741_040 Hb_001741_040 Hb_001638_210--Hb_001741_040 Hb_000120_650 Hb_000120_650 Hb_001638_210--Hb_000120_650 Hb_075449_050 Hb_075449_050 Hb_001638_210--Hb_075449_050 Hb_001638_210--Hb_048937_030 Hb_006018_030--Hb_075449_050 Hb_006018_030--Hb_048937_030 Hb_000107_070 Hb_000107_070 Hb_006018_030--Hb_000107_070 Hb_001391_020 Hb_001391_020 Hb_006018_030--Hb_001391_020 Hb_001671_060 Hb_001671_060 Hb_006018_030--Hb_001671_060 Hb_000742_270 Hb_000742_270 Hb_048937_030--Hb_000742_270 Hb_011671_400 Hb_011671_400 Hb_048937_030--Hb_011671_400 Hb_048937_030--Hb_000107_070 Hb_003020_310 Hb_003020_310 Hb_048937_030--Hb_003020_310 Hb_000175_610 Hb_000175_610 Hb_048937_030--Hb_000175_610 Hb_002099_050--Hb_011671_400 Hb_002099_050--Hb_008864_060 Hb_000250_010 Hb_000250_010 Hb_002099_050--Hb_000250_010 Hb_001892_120 Hb_001892_120 Hb_002099_050--Hb_001892_120 Hb_002260_090 Hb_002260_090 Hb_002099_050--Hb_002260_090 Hb_003052_040 Hb_003052_040 Hb_002099_050--Hb_003052_040 Hb_007590_060 Hb_007590_060 Hb_020096_020--Hb_007590_060 Hb_008014_070 Hb_008014_070 Hb_020096_020--Hb_008014_070 Hb_001799_080 Hb_001799_080 Hb_020096_020--Hb_001799_080 Hb_159679_010 Hb_159679_010 Hb_020096_020--Hb_159679_010 Hb_020096_020--Hb_001638_210 Hb_027892_010 Hb_027892_010 Hb_020096_020--Hb_027892_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0853515 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.130849 0.0514448 0.186511 0 0

CAGE analysis