Hb_142368_010

Information

Type -
Description -
Location Contig142368: 8505-16113
Sequence    

Annotation

kegg
ID rcu:RCOM_1406200
description mRNA (guanine-7-)methyltransferase, putative (EC:2.1.1.56)
nr
ID XP_002528402.1
description mRNA (guanine-7-)methyltransferase, putative [Ricinus communis]
swissprot
ID Q9LHQ7
description mRNA cap guanine-N7 methyltransferase 1 OS=Arabidopsis thaliana GN=At3g20650 PE=2 SV=1
trembl
ID B9SQY3
description mRNA cap guanine-N7 methyltransferase OS=Ricinus communis GN=RCOM_1406200 PE=3 SV=1
Gene Ontology
ID GO:0005634
description mrna cap guanine-n7 methyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11270: 8576-9427 , PASA_asmbl_11271: 9454-16062
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_142368_010 0.0 - - mRNA (guanine-7-)methyltransferase, putative [Ricinus communis]
2 Hb_021576_100 0.0665533799 - - Enoyl-CoA hydratase, mitochondrial precursor, putative [Ricinus communis]
3 Hb_152175_010 0.0708087424 - - Protein grpE, putative [Ricinus communis]
4 Hb_003001_080 0.0760900846 - - PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]
5 Hb_001227_030 0.0767538969 - - PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1 [Jatropha curcas]
6 Hb_005137_050 0.0827821814 - - PREDICTED: nuclear pore complex protein NUP58 [Jatropha curcas]
7 Hb_001862_210 0.0845706442 - - PREDICTED: LOW QUALITY PROTEIN: salutaridine reductase-like [Citrus sinensis]
8 Hb_002890_290 0.0858729184 - - PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
9 Hb_079526_030 0.0862306111 - - PREDICTED: uncharacterized protein LOC105638120 [Jatropha curcas]
10 Hb_002686_170 0.0901939498 - - PREDICTED: uncharacterized protein LOC105632645 isoform X1 [Jatropha curcas]
11 Hb_012384_030 0.0906959477 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Jatropha curcas]
12 Hb_001981_030 0.0909340229 - - nuclear acid binding protein, putative [Ricinus communis]
13 Hb_000331_110 0.0912498632 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
14 Hb_002217_110 0.0914753397 - - PREDICTED: craniofacial development protein 1 [Jatropha curcas]
15 Hb_004837_180 0.0917554228 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
16 Hb_003747_200 0.0930093346 - - PREDICTED: DNA cross-link repair protein SNM1 [Jatropha curcas]
17 Hb_000010_110 0.0934090253 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Jatropha curcas]
18 Hb_000575_040 0.0952203837 - - PREDICTED: serine/arginine-rich splicing factor SC35 [Jatropha curcas]
19 Hb_000866_410 0.0953296934 - - hypothetical protein JCGZ_14422 [Jatropha curcas]
20 Hb_002876_230 0.0954363052 - - PREDICTED: uncharacterized protein LOC105633933 [Jatropha curcas]

Gene co-expression network

sample Hb_142368_010 Hb_142368_010 Hb_021576_100 Hb_021576_100 Hb_142368_010--Hb_021576_100 Hb_152175_010 Hb_152175_010 Hb_142368_010--Hb_152175_010 Hb_003001_080 Hb_003001_080 Hb_142368_010--Hb_003001_080 Hb_001227_030 Hb_001227_030 Hb_142368_010--Hb_001227_030 Hb_005137_050 Hb_005137_050 Hb_142368_010--Hb_005137_050 Hb_001862_210 Hb_001862_210 Hb_142368_010--Hb_001862_210 Hb_000308_030 Hb_000308_030 Hb_021576_100--Hb_000308_030 Hb_005337_090 Hb_005337_090 Hb_021576_100--Hb_005337_090 Hb_073973_130 Hb_073973_130 Hb_021576_100--Hb_073973_130 Hb_000005_220 Hb_000005_220 Hb_021576_100--Hb_000005_220 Hb_079526_030 Hb_079526_030 Hb_021576_100--Hb_079526_030 Hb_152175_010--Hb_005137_050 Hb_152175_010--Hb_003001_080 Hb_000563_230 Hb_000563_230 Hb_152175_010--Hb_000563_230 Hb_002890_290 Hb_002890_290 Hb_152175_010--Hb_002890_290 Hb_152175_010--Hb_001227_030 Hb_001163_050 Hb_001163_050 Hb_003001_080--Hb_001163_050 Hb_000340_400 Hb_000340_400 Hb_003001_080--Hb_000340_400 Hb_008453_140 Hb_008453_140 Hb_003001_080--Hb_008453_140 Hb_004837_180 Hb_004837_180 Hb_003001_080--Hb_004837_180 Hb_032202_140 Hb_032202_140 Hb_003001_080--Hb_032202_140 Hb_005489_020 Hb_005489_020 Hb_001227_030--Hb_005489_020 Hb_000025_410 Hb_000025_410 Hb_001227_030--Hb_000025_410 Hb_001227_030--Hb_002890_290 Hb_005779_080 Hb_005779_080 Hb_001227_030--Hb_005779_080 Hb_001227_030--Hb_004837_180 Hb_001247_130 Hb_001247_130 Hb_005137_050--Hb_001247_130 Hb_002411_030 Hb_002411_030 Hb_005137_050--Hb_002411_030 Hb_032208_040 Hb_032208_040 Hb_005137_050--Hb_032208_040 Hb_000061_470 Hb_000061_470 Hb_005137_050--Hb_000061_470 Hb_000130_240 Hb_000130_240 Hb_005137_050--Hb_000130_240 Hb_001723_020 Hb_001723_020 Hb_001862_210--Hb_001723_020 Hb_001862_210--Hb_002890_290 Hb_001862_210--Hb_000340_400 Hb_001862_210--Hb_004837_180 Hb_000069_380 Hb_000069_380 Hb_001862_210--Hb_000069_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.383 18.9247 23.685 7.76392 18.1773 14.0748
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.9811 16.8521 13.784 13.5433 13.5262

CAGE analysis