Hb_116264_010

Information

Type -
Description -
Location Contig116264: 347-745
Sequence    

Annotation

kegg
ID rcu:RCOM_0339640
description 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative (EC:3.1.4.11)
nr
ID KDP44118.1
description hypothetical protein JCGZ_05585 [Jatropha curcas]
swissprot
ID Q9LY51
description Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1
trembl
ID A0A067LA64
description Phosphoinositide phospholipase C OS=Jatropha curcas GN=JCGZ_05585 PE=4 SV=1
Gene Ontology
ID GO:0005515
description phosphoinositide phospholipase c 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05008: 44-1038
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_116264_010 0.0 - - hypothetical protein JCGZ_05585 [Jatropha curcas]
2 Hb_111648_010 0.0965646044 rubber biosynthesis Gene Name: REF1 rubber elongation factor [Hevea brasiliensis]
3 Hb_001221_510 0.1065257129 - - Protein HVA22, putative [Ricinus communis]
4 Hb_004410_010 0.108881804 - - PREDICTED: probable 1-acylglycerol-3-phosphate O-acyltransferase [Jatropha curcas]
5 Hb_002660_160 0.1097389058 - - protein binding protein, putative [Ricinus communis]
6 Hb_000032_220 0.1137020735 - - PREDICTED: abscisic acid receptor PYL8-like isoform X1 [Jatropha curcas]
7 Hb_002352_010 0.1188626876 - - PREDICTED: rop guanine nucleotide exchange factor 1 [Jatropha curcas]
8 Hb_001584_300 0.1214492443 - - PREDICTED: pyroglutamyl-peptidase 1-like protein [Jatropha curcas]
9 Hb_001473_120 0.1238863112 - - Uncharacterized protein isoform 1 [Theobroma cacao]
10 Hb_000085_250 0.124332659 - - sodium/hydrogen exchanger, putative [Ricinus communis]
11 Hb_001754_010 0.125844365 - - translationally controlled tumor protein [Hevea brasiliensis]
12 Hb_074590_010 0.1285224893 transcription factor TF Family: ERF ethylene-responsive element binding protein 2 [Hevea brasiliensis]
13 Hb_000362_210 0.129001203 - - PREDICTED: transcription elongation factor 1 homolog [Jatropha curcas]
14 Hb_007810_030 0.1300627737 - - PREDICTED: uncharacterized protein LOC105647693 [Jatropha curcas]
15 Hb_023226_090 0.1336544689 - - PREDICTED: glycolipid transfer protein [Jatropha curcas]
16 Hb_001396_220 0.1337076589 - - nuclear transport factor, putative [Ricinus communis]
17 Hb_001629_100 0.1366366832 - - PREDICTED: uncharacterized protein LOC100252136 isoform X2 [Vitis vinifera]
18 Hb_001008_010 0.136852098 - - PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Populus euphratica]
19 Hb_001173_040 0.1386654139 - - PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Jatropha curcas]
20 Hb_024505_040 0.1389176028 - - homogentisate geranylgeranyl transferase [Hevea brasiliensis]

Gene co-expression network

sample Hb_116264_010 Hb_116264_010 Hb_111648_010 Hb_111648_010 Hb_116264_010--Hb_111648_010 Hb_001221_510 Hb_001221_510 Hb_116264_010--Hb_001221_510 Hb_004410_010 Hb_004410_010 Hb_116264_010--Hb_004410_010 Hb_002660_160 Hb_002660_160 Hb_116264_010--Hb_002660_160 Hb_000032_220 Hb_000032_220 Hb_116264_010--Hb_000032_220 Hb_002352_010 Hb_002352_010 Hb_116264_010--Hb_002352_010 Hb_001514_180 Hb_001514_180 Hb_111648_010--Hb_001514_180 Hb_000041_070 Hb_000041_070 Hb_111648_010--Hb_000041_070 Hb_000078_010 Hb_000078_010 Hb_111648_010--Hb_000078_010 Hb_024505_040 Hb_024505_040 Hb_111648_010--Hb_024505_040 Hb_000444_030 Hb_000444_030 Hb_111648_010--Hb_000444_030 Hb_000491_090 Hb_000491_090 Hb_001221_510--Hb_000491_090 Hb_001221_510--Hb_111648_010 Hb_001396_220 Hb_001396_220 Hb_001221_510--Hb_001396_220 Hb_004448_020 Hb_004448_020 Hb_001221_510--Hb_004448_020 Hb_000048_050 Hb_000048_050 Hb_001221_510--Hb_000048_050 Hb_001252_140 Hb_001252_140 Hb_004410_010--Hb_001252_140 Hb_007747_130 Hb_007747_130 Hb_004410_010--Hb_007747_130 Hb_004410_010--Hb_002660_160 Hb_001104_120 Hb_001104_120 Hb_004410_010--Hb_001104_120 Hb_000787_070 Hb_000787_070 Hb_004410_010--Hb_000787_070 Hb_000362_210 Hb_000362_210 Hb_002660_160--Hb_000362_210 Hb_007021_020 Hb_007021_020 Hb_002660_160--Hb_007021_020 Hb_010172_030 Hb_010172_030 Hb_002660_160--Hb_010172_030 Hb_007047_010 Hb_007047_010 Hb_002660_160--Hb_007047_010 Hb_000085_250 Hb_000085_250 Hb_002660_160--Hb_000085_250 Hb_002749_100 Hb_002749_100 Hb_002660_160--Hb_002749_100 Hb_000032_220--Hb_001396_220 Hb_015934_020 Hb_015934_020 Hb_000032_220--Hb_015934_020 Hb_002387_060 Hb_002387_060 Hb_000032_220--Hb_002387_060 Hb_002078_460 Hb_002078_460 Hb_000032_220--Hb_002078_460 Hb_183963_020 Hb_183963_020 Hb_000032_220--Hb_183963_020 Hb_000032_220--Hb_002352_010 Hb_001473_130 Hb_001473_130 Hb_002352_010--Hb_001473_130 Hb_002527_070 Hb_002527_070 Hb_002352_010--Hb_002527_070 Hb_000427_110 Hb_000427_110 Hb_002352_010--Hb_000427_110 Hb_001677_110 Hb_001677_110 Hb_002352_010--Hb_001677_110 Hb_002326_030 Hb_002326_030 Hb_002352_010--Hb_002326_030 Hb_012522_030 Hb_012522_030 Hb_002352_010--Hb_012522_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
122.736 8.63042 4.10178 60.2628 108.422 331.954
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
426.909 329.98 310.64 41.332 15.4673

CAGE analysis