Hb_004410_010

Information

Type -
Description -
Location Contig4410: 8854-12935
Sequence    

Annotation

kegg
ID csv:101208838
description abhydrolase domain-containing protein 4-like
nr
ID XP_012071978.1
description PREDICTED: probable 1-acylglycerol-3-phosphate O-acyltransferase [Jatropha curcas]
swissprot
ID Q0J0A4
description Probable 1-acylglycerol-3-phosphate O-acyltransferase OS=Oryza sativa subsp. japonica GN=Os09g0520200 PE=3 SV=3
trembl
ID A0A067KUD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04518 PE=4 SV=1
Gene Ontology
ID GO:0004623
description probable 1-acylglycerol-3-phosphate o-acyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42653: 8916-12870 , PASA_asmbl_42654: 8974-11396
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004410_010 0.0 - - PREDICTED: probable 1-acylglycerol-3-phosphate O-acyltransferase [Jatropha curcas]
2 Hb_001252_140 0.0972555308 - - catalytic, putative [Ricinus communis]
3 Hb_007747_130 0.0986742928 - - PREDICTED: uncharacterized protein LOC105635879 [Jatropha curcas]
4 Hb_002660_160 0.1002240213 - - protein binding protein, putative [Ricinus communis]
5 Hb_001104_120 0.1071671002 - - -
6 Hb_116264_010 0.108881804 - - hypothetical protein JCGZ_05585 [Jatropha curcas]
7 Hb_000787_070 0.1092831552 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
8 Hb_115919_020 0.1127466805 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl-diphosphate synthase [Hevea brasiliensis]
9 Hb_000085_250 0.1136944212 - - sodium/hydrogen exchanger, putative [Ricinus communis]
10 Hb_000362_210 0.1147353402 - - PREDICTED: transcription elongation factor 1 homolog [Jatropha curcas]
11 Hb_183963_020 0.114956943 - - PREDICTED: uncharacterized protein LOC105644615 [Jatropha curcas]
12 Hb_000479_180 0.1184492034 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001621_180 0.1184610932 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Jatropha curcas]
14 Hb_001266_050 0.1191320878 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like isoform X2 [Elaeis guineensis]
15 Hb_008408_030 0.1193353275 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
16 Hb_001584_300 0.1213465614 - - PREDICTED: pyroglutamyl-peptidase 1-like protein [Jatropha curcas]
17 Hb_000563_590 0.1213989175 - - PREDICTED: 60S ribosomal protein L22-2-like [Jatropha curcas]
18 Hb_017711_010 0.1215878074 - - PREDICTED: mitochondrial import receptor subunit TOM9-2 [Jatropha curcas]
19 Hb_092272_020 0.1234213828 - - hypothetical protein EUGRSUZ_F00278 [Eucalyptus grandis]
20 Hb_000089_130 0.1270908716 - - mitochondrial ribosomal protein S16, putative [Ricinus communis]

Gene co-expression network

sample Hb_004410_010 Hb_004410_010 Hb_001252_140 Hb_001252_140 Hb_004410_010--Hb_001252_140 Hb_007747_130 Hb_007747_130 Hb_004410_010--Hb_007747_130 Hb_002660_160 Hb_002660_160 Hb_004410_010--Hb_002660_160 Hb_001104_120 Hb_001104_120 Hb_004410_010--Hb_001104_120 Hb_116264_010 Hb_116264_010 Hb_004410_010--Hb_116264_010 Hb_000787_070 Hb_000787_070 Hb_004410_010--Hb_000787_070 Hb_001621_180 Hb_001621_180 Hb_001252_140--Hb_001621_180 Hb_001252_140--Hb_007747_130 Hb_006469_060 Hb_006469_060 Hb_001252_140--Hb_006469_060 Hb_001252_140--Hb_001104_120 Hb_034585_040 Hb_034585_040 Hb_001252_140--Hb_034585_040 Hb_000184_180 Hb_000184_180 Hb_007747_130--Hb_000184_180 Hb_115919_020 Hb_115919_020 Hb_007747_130--Hb_115919_020 Hb_007747_130--Hb_006469_060 Hb_007747_130--Hb_001621_180 Hb_000362_210 Hb_000362_210 Hb_002660_160--Hb_000362_210 Hb_007021_020 Hb_007021_020 Hb_002660_160--Hb_007021_020 Hb_010172_030 Hb_010172_030 Hb_002660_160--Hb_010172_030 Hb_007047_010 Hb_007047_010 Hb_002660_160--Hb_007047_010 Hb_000085_250 Hb_000085_250 Hb_002660_160--Hb_000085_250 Hb_002749_100 Hb_002749_100 Hb_002660_160--Hb_002749_100 Hb_000563_590 Hb_000563_590 Hb_001104_120--Hb_000563_590 Hb_000061_160 Hb_000061_160 Hb_001104_120--Hb_000061_160 Hb_007441_180 Hb_007441_180 Hb_001104_120--Hb_007441_180 Hb_001804_040 Hb_001804_040 Hb_001104_120--Hb_001804_040 Hb_001104_120--Hb_001621_180 Hb_001454_330 Hb_001454_330 Hb_001104_120--Hb_001454_330 Hb_111648_010 Hb_111648_010 Hb_116264_010--Hb_111648_010 Hb_001221_510 Hb_001221_510 Hb_116264_010--Hb_001221_510 Hb_116264_010--Hb_002660_160 Hb_000032_220 Hb_000032_220 Hb_116264_010--Hb_000032_220 Hb_002352_010 Hb_002352_010 Hb_116264_010--Hb_002352_010 Hb_005016_130 Hb_005016_130 Hb_000787_070--Hb_005016_130 Hb_000787_070--Hb_115919_020 Hb_006132_060 Hb_006132_060 Hb_000787_070--Hb_006132_060 Hb_001102_010 Hb_001102_010 Hb_000787_070--Hb_001102_010 Hb_024505_040 Hb_024505_040 Hb_000787_070--Hb_024505_040 Hb_000078_030 Hb_000078_030 Hb_000787_070--Hb_000078_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
105.954 4.73242 2.60934 33.1751 112.709 173.461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
262.169 259.708 134.355 25.2108 7.80481

CAGE analysis