Hb_049285_010

Information

Type -
Description -
Location Contig49285: 418-1651
Sequence    

Annotation

kegg
ID rcu:RCOM_0766900
description (R)-limonene synthase, putative (EC:4.2.3.20)
nr
ID XP_012075360.1
description PREDICTED: terpene synthase 10-like [Jatropha curcas]
swissprot
ID B9T536
description Terpene synthase 10 OS=Ricinus communis GN=TPS10 PE=2 SV=1
trembl
ID A0A067KK14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09482 PE=4 SV=1
Gene Ontology
ID GO:0010333
description terpene synthase 10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049285_010 0.0 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
2 Hb_007533_050 0.1163340496 - - -
3 Hb_006356_030 0.1261551486 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
4 Hb_000923_110 0.1261623037 - - PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
5 Hb_000567_270 0.1306821621 - - hypothetical protein L484_017162 [Morus notabilis]
6 Hb_000432_020 0.1332500055 desease resistance Gene Name: Tropomyosin_1 PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
7 Hb_030987_010 0.1343884559 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
8 Hb_000405_010 0.1403980648 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
9 Hb_011931_090 0.1420910721 - - -
10 Hb_006455_020 0.1457391586 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
11 Hb_010964_030 0.1459579795 - - PREDICTED: uncharacterized protein LOC105647958 [Jatropha curcas]
12 Hb_003311_020 0.1537856441 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003772_010 0.1546532471 - - polyprotein [Oryza australiensis]
14 Hb_000522_030 0.1559226983 - - hypothetical protein VITISV_006017 [Vitis vinifera]
15 Hb_000907_050 0.1572857548 - - -
16 Hb_010367_010 0.1595813453 - - -
17 Hb_003868_010 0.159858612 - - -
18 Hb_000466_180 0.1599919379 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_007167_100 0.1600046948 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_007251_010 0.1600249746 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]

Gene co-expression network

sample Hb_049285_010 Hb_049285_010 Hb_007533_050 Hb_007533_050 Hb_049285_010--Hb_007533_050 Hb_006356_030 Hb_006356_030 Hb_049285_010--Hb_006356_030 Hb_000923_110 Hb_000923_110 Hb_049285_010--Hb_000923_110 Hb_000567_270 Hb_000567_270 Hb_049285_010--Hb_000567_270 Hb_000432_020 Hb_000432_020 Hb_049285_010--Hb_000432_020 Hb_030987_010 Hb_030987_010 Hb_049285_010--Hb_030987_010 Hb_032016_010 Hb_032016_010 Hb_007533_050--Hb_032016_010 Hb_007533_050--Hb_000432_020 Hb_003311_020 Hb_003311_020 Hb_007533_050--Hb_003311_020 Hb_007533_050--Hb_000567_270 Hb_006455_020 Hb_006455_020 Hb_007533_050--Hb_006455_020 Hb_006356_030--Hb_000923_110 Hb_054127_020 Hb_054127_020 Hb_006356_030--Hb_054127_020 Hb_010367_010 Hb_010367_010 Hb_006356_030--Hb_010367_010 Hb_003868_010 Hb_003868_010 Hb_006356_030--Hb_003868_010 Hb_000025_460 Hb_000025_460 Hb_006356_030--Hb_000025_460 Hb_120076_010 Hb_120076_010 Hb_006356_030--Hb_120076_010 Hb_000923_110--Hb_054127_020 Hb_000923_110--Hb_010367_010 Hb_000923_110--Hb_003868_010 Hb_000466_180 Hb_000466_180 Hb_000923_110--Hb_000466_180 Hb_007167_100 Hb_007167_100 Hb_000923_110--Hb_007167_100 Hb_000567_270--Hb_003311_020 Hb_000567_270--Hb_032016_010 Hb_000644_020 Hb_000644_020 Hb_000567_270--Hb_000644_020 Hb_009851_090 Hb_009851_090 Hb_000567_270--Hb_009851_090 Hb_000567_270--Hb_006455_020 Hb_003414_040 Hb_003414_040 Hb_000432_020--Hb_003414_040 Hb_000432_020--Hb_003311_020 Hb_093388_010 Hb_093388_010 Hb_000432_020--Hb_093388_010 Hb_151401_010 Hb_151401_010 Hb_000432_020--Hb_151401_010 Hb_001250_030 Hb_001250_030 Hb_000432_020--Hb_001250_030 Hb_010964_030 Hb_010964_030 Hb_030987_010--Hb_010964_030 Hb_000907_050 Hb_000907_050 Hb_030987_010--Hb_000907_050 Hb_003772_010 Hb_003772_010 Hb_030987_010--Hb_003772_010 Hb_098361_010 Hb_098361_010 Hb_030987_010--Hb_098361_010 Hb_000581_070 Hb_000581_070 Hb_030987_010--Hb_000581_070 Hb_007668_030 Hb_007668_030 Hb_030987_010--Hb_007668_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.47327 0.832843 1.538 0 0.0276757
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.11326 0 10.884 65.0352

CAGE analysis