Hb_037964_010

Information

Type -
Description -
Location Contig37964: 558-1209
Sequence    

Annotation

kegg
ID pop:POPTR_0006s03150g
description hypothetical protein
nr
ID EYU26244.1
description hypothetical protein MIMGU_mgv1a000906mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022QF57
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000906mg PE=3 SV=1
Gene Ontology
ID GO:0016021
description leucine-rich repeat protein kinase family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_037964_010 0.0 - - hypothetical protein MIMGU_mgv1a000906mg [Erythranthe guttata]
2 Hb_000008_260 0.2474131707 - - conserved hypothetical protein [Ricinus communis]
3 Hb_009467_030 0.2493294125 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
4 Hb_005736_040 0.2548612059 - - -
5 Hb_001787_040 0.2573217049 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_006452_150 0.2643087014 transcription factor TF Family: M-type PREDICTED: MADS-box transcription factor 7-like [Jatropha curcas]
7 Hb_000200_320 0.2779302201 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_09311 [Jatropha curcas]
8 Hb_102438_010 0.2798043412 - - -
9 Hb_000749_080 0.2818010994 - - Alpha-expansin 12 precursor, putative [Ricinus communis]
10 Hb_004917_050 0.2838440352 - - -
11 Hb_000979_050 0.2996055527 - - -
12 Hb_160366_010 0.3011368569 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
13 Hb_003001_100 0.3030059928 - - PREDICTED: uncharacterized protein LOC103334281 [Prunus mume]
14 Hb_000123_200 0.3030248839 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
15 Hb_007904_270 0.3067408815 - - -
16 Hb_002498_090 0.3083384838 - - -
17 Hb_159085_010 0.3142405034 - - -
18 Hb_001386_080 0.3163194192 - - hypothetical protein JCGZ_06052 [Jatropha curcas]
19 Hb_001186_080 0.316876816 - - PREDICTED: F-box protein FBW2-like [Nelumbo nucifera]
20 Hb_039305_010 0.3178681529 - - hypothetical protein JCGZ_18422 [Jatropha curcas]

Gene co-expression network

sample Hb_037964_010 Hb_037964_010 Hb_000008_260 Hb_000008_260 Hb_037964_010--Hb_000008_260 Hb_009467_030 Hb_009467_030 Hb_037964_010--Hb_009467_030 Hb_005736_040 Hb_005736_040 Hb_037964_010--Hb_005736_040 Hb_001787_040 Hb_001787_040 Hb_037964_010--Hb_001787_040 Hb_006452_150 Hb_006452_150 Hb_037964_010--Hb_006452_150 Hb_000200_320 Hb_000200_320 Hb_037964_010--Hb_000200_320 Hb_000008_260--Hb_009467_030 Hb_102438_010 Hb_102438_010 Hb_000008_260--Hb_102438_010 Hb_004917_050 Hb_004917_050 Hb_000008_260--Hb_004917_050 Hb_007904_270 Hb_007904_270 Hb_000008_260--Hb_007904_270 Hb_000979_050 Hb_000979_050 Hb_000008_260--Hb_000979_050 Hb_159085_010 Hb_159085_010 Hb_000008_260--Hb_159085_010 Hb_009467_030--Hb_102438_010 Hb_009467_030--Hb_004917_050 Hb_009467_030--Hb_007904_270 Hb_001386_080 Hb_001386_080 Hb_009467_030--Hb_001386_080 Hb_009467_030--Hb_000979_050 Hb_005736_040--Hb_159085_010 Hb_005736_040--Hb_007904_270 Hb_001865_110 Hb_001865_110 Hb_005736_040--Hb_001865_110 Hb_005736_040--Hb_009467_030 Hb_005736_040--Hb_000008_260 Hb_001787_040--Hb_000008_260 Hb_001787_040--Hb_102438_010 Hb_001787_040--Hb_009467_030 Hb_000987_090 Hb_000987_090 Hb_001787_040--Hb_000987_090 Hb_001787_040--Hb_159085_010 Hb_001504_320 Hb_001504_320 Hb_006452_150--Hb_001504_320 Hb_000300_210 Hb_000300_210 Hb_006452_150--Hb_000300_210 Hb_002498_090 Hb_002498_090 Hb_006452_150--Hb_002498_090 Hb_000387_060 Hb_000387_060 Hb_006452_150--Hb_000387_060 Hb_001101_010 Hb_001101_010 Hb_006452_150--Hb_001101_010 Hb_001425_110 Hb_001425_110 Hb_006452_150--Hb_001425_110 Hb_000028_120 Hb_000028_120 Hb_000200_320--Hb_000028_120 Hb_000803_040 Hb_000803_040 Hb_000200_320--Hb_000803_040 Hb_004931_010 Hb_004931_010 Hb_000200_320--Hb_004931_010 Hb_000749_080 Hb_000749_080 Hb_000200_320--Hb_000749_080 Hb_000094_260 Hb_000094_260 Hb_000200_320--Hb_000094_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.16361 0 0.300822 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.705615 0.739167 0 0 0

CAGE analysis