Hb_102438_010

Information

Type -
Description -
Location Contig102438: 6616-15664
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_102438_010 0.0 - - -
2 Hb_000008_260 0.0819698869 - - conserved hypothetical protein [Ricinus communis]
3 Hb_009467_030 0.1022514247 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
4 Hb_004917_050 0.1745488154 - - -
5 Hb_007904_270 0.2086186569 - - -
6 Hb_001787_040 0.2209548894 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
7 Hb_159085_010 0.2320042267 - - -
8 Hb_000067_020 0.268124516 desease resistance Gene Name: NB-ARC PREDICTED: inactive disease resistance protein RPS4-like [Jatropha curcas]
9 Hb_140618_010 0.2681363089 - - -
10 Hb_001241_090 0.2681363113 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
11 Hb_052600_010 0.2681363522 - - -
12 Hb_005396_140 0.2681470602 - - -
13 Hb_001105_080 0.2682546192 - - -
14 Hb_000979_050 0.2697612741 - - -
15 Hb_003001_100 0.2703239722 - - PREDICTED: uncharacterized protein LOC103334281 [Prunus mume]
16 Hb_005834_030 0.2735835403 - - -
17 Hb_003675_010 0.2764163106 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
18 Hb_000956_140 0.2774306951 - - -
19 Hb_005736_040 0.2791338844 - - -
20 Hb_037964_010 0.2798043412 - - hypothetical protein MIMGU_mgv1a000906mg [Erythranthe guttata]

Gene co-expression network

sample Hb_102438_010 Hb_102438_010 Hb_000008_260 Hb_000008_260 Hb_102438_010--Hb_000008_260 Hb_009467_030 Hb_009467_030 Hb_102438_010--Hb_009467_030 Hb_004917_050 Hb_004917_050 Hb_102438_010--Hb_004917_050 Hb_007904_270 Hb_007904_270 Hb_102438_010--Hb_007904_270 Hb_001787_040 Hb_001787_040 Hb_102438_010--Hb_001787_040 Hb_159085_010 Hb_159085_010 Hb_102438_010--Hb_159085_010 Hb_000008_260--Hb_009467_030 Hb_000008_260--Hb_004917_050 Hb_000008_260--Hb_007904_270 Hb_000979_050 Hb_000979_050 Hb_000008_260--Hb_000979_050 Hb_000008_260--Hb_159085_010 Hb_009467_030--Hb_004917_050 Hb_009467_030--Hb_007904_270 Hb_001386_080 Hb_001386_080 Hb_009467_030--Hb_001386_080 Hb_009467_030--Hb_000979_050 Hb_004917_050--Hb_000979_050 Hb_004917_050--Hb_001386_080 Hb_008092_140 Hb_008092_140 Hb_004917_050--Hb_008092_140 Hb_007904_270--Hb_159085_010 Hb_007904_270--Hb_004917_050 Hb_000736_010 Hb_000736_010 Hb_007904_270--Hb_000736_010 Hb_001787_040--Hb_000008_260 Hb_001787_040--Hb_009467_030 Hb_037964_010 Hb_037964_010 Hb_001787_040--Hb_037964_010 Hb_000987_090 Hb_000987_090 Hb_001787_040--Hb_000987_090 Hb_001787_040--Hb_159085_010 Hb_039305_010 Hb_039305_010 Hb_159085_010--Hb_039305_010 Hb_159085_010--Hb_000736_010 Hb_003773_030 Hb_003773_030 Hb_159085_010--Hb_003773_030 Hb_001141_400 Hb_001141_400 Hb_159085_010--Hb_001141_400 Hb_000373_300 Hb_000373_300 Hb_159085_010--Hb_000373_300 Hb_000067_020 Hb_000067_020 Hb_159085_010--Hb_000067_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.00916511 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0415847 0.0163605 0 0 0

CAGE analysis