Hb_030736_110

Information

Type -
Description -
Location Contig30736: 67932-68898
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030736_110 0.0 - - -
2 Hb_000364_110 0.1792790078 - - hypothetical protein PRUPE_ppa016620mg [Prunus persica]
3 Hb_005803_020 0.1899322208 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
4 Hb_003772_040 0.3096948106 - - -
5 Hb_004800_110 0.3177878884 - - PREDICTED: proline-rich receptor-like protein kinase PERK4 [Jatropha curcas]
6 Hb_001825_050 0.3179682952 - - -
7 Hb_007694_030 0.3184698343 - - hypothetical protein SORBIDRAFT_04g037485 [Sorghum bicolor]
8 Hb_002710_020 0.3193831247 - - -
9 Hb_152439_010 0.3222846153 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
10 Hb_003811_010 0.3252284913 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
11 Hb_002485_020 0.3283638154 - - metal transport family protein [Populus trichocarpa]
12 Hb_004445_010 0.3594542724 - - kinase family protein [Populus trichocarpa]
13 Hb_001221_010 0.3762512365 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000069_080 0.3792303598 - - PREDICTED: laccase-6 [Jatropha curcas]
15 Hb_002835_130 0.3853747637 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
16 Hb_007101_220 0.3873922449 - - Gibberellin-regulated protein 3 precursor, putative [Ricinus communis]
17 Hb_010863_040 0.3922524088 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
18 Hb_001031_060 0.39384312 - - PREDICTED: uncharacterized protein LOC103940329 [Pyrus x bretschneideri]
19 Hb_006810_070 0.396932279 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
20 Hb_000205_150 0.399713988 - - PREDICTED: uncharacterized protein LOC105647752 [Jatropha curcas]

Gene co-expression network

sample Hb_030736_110 Hb_030736_110 Hb_000364_110 Hb_000364_110 Hb_030736_110--Hb_000364_110 Hb_005803_020 Hb_005803_020 Hb_030736_110--Hb_005803_020 Hb_003772_040 Hb_003772_040 Hb_030736_110--Hb_003772_040 Hb_004800_110 Hb_004800_110 Hb_030736_110--Hb_004800_110 Hb_001825_050 Hb_001825_050 Hb_030736_110--Hb_001825_050 Hb_007694_030 Hb_007694_030 Hb_030736_110--Hb_007694_030 Hb_152439_010 Hb_152439_010 Hb_000364_110--Hb_152439_010 Hb_000364_110--Hb_005803_020 Hb_001221_010 Hb_001221_010 Hb_000364_110--Hb_001221_010 Hb_000364_110--Hb_003772_040 Hb_002240_100 Hb_002240_100 Hb_000364_110--Hb_002240_100 Hb_001524_100 Hb_001524_100 Hb_005803_020--Hb_001524_100 Hb_002485_020 Hb_002485_020 Hb_005803_020--Hb_002485_020 Hb_005803_020--Hb_152439_010 Hb_003811_010 Hb_003811_010 Hb_005803_020--Hb_003811_010 Hb_030215_010 Hb_030215_010 Hb_003772_040--Hb_030215_010 Hb_004445_010 Hb_004445_010 Hb_003772_040--Hb_004445_010 Hb_001031_060 Hb_001031_060 Hb_003772_040--Hb_001031_060 Hb_006634_010 Hb_006634_010 Hb_003772_040--Hb_006634_010 Hb_002710_020 Hb_002710_020 Hb_004800_110--Hb_002710_020 Hb_004800_110--Hb_007694_030 Hb_004800_110--Hb_003811_010 Hb_000069_080 Hb_000069_080 Hb_004800_110--Hb_000069_080 Hb_004800_110--Hb_002485_020 Hb_002835_130 Hb_002835_130 Hb_004800_110--Hb_002835_130 Hb_001825_050--Hb_007694_030 Hb_001825_050--Hb_004800_110 Hb_001825_050--Hb_002710_020 Hb_000224_110 Hb_000224_110 Hb_001825_050--Hb_000224_110 Hb_001825_050--Hb_003811_010 Hb_001825_050--Hb_002485_020 Hb_007694_030--Hb_002710_020 Hb_007694_030--Hb_000069_080 Hb_007694_030--Hb_002835_130 Hb_007694_030--Hb_003811_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.177595 0 0.208674 0.0946071
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0844648 0

CAGE analysis