Hb_001825_050

Information

Type -
Description -
Location Contig1825: 61254-61737
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001825_050 0.0 - - -
2 Hb_007694_030 0.148907258 - - hypothetical protein SORBIDRAFT_04g037485 [Sorghum bicolor]
3 Hb_004800_110 0.1646065033 - - PREDICTED: proline-rich receptor-like protein kinase PERK4 [Jatropha curcas]
4 Hb_002710_020 0.1653220161 - - -
5 Hb_000224_110 0.2015741396 - - -
6 Hb_003811_010 0.2412066575 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
7 Hb_002485_020 0.2503762491 - - metal transport family protein [Populus trichocarpa]
8 Hb_000069_080 0.2577581587 - - PREDICTED: laccase-6 [Jatropha curcas]
9 Hb_002835_130 0.2614258698 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
10 Hb_010863_040 0.2741423142 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
11 Hb_030736_110 0.3179682952 - - -
12 Hb_001369_310 0.3215811707 - - tonoplast intrinsic protein, putative [Ricinus communis]
13 Hb_001184_120 0.3236772184 - - hypothetical protein CICLE_v10025281mg [Citrus clementina]
14 Hb_001433_060 0.3237754216 - - hypothetical protein JCGZ_23291 [Jatropha curcas]
15 Hb_143643_010 0.3351926019 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC103967596 [Pyrus x bretschneideri]
16 Hb_000230_070 0.335967564 - - Galactose oxidase precursor, putative [Ricinus communis]
17 Hb_000680_040 0.3369684826 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
18 Hb_000200_260 0.3468689576 - - PREDICTED: uncharacterized protein LOC104232531 isoform X2 [Nicotiana sylvestris]
19 Hb_000212_340 0.3482048947 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008014_080 0.3485868405 - - PREDICTED: uncharacterized protein LOC103848614 [Brassica rapa]

Gene co-expression network

sample Hb_001825_050 Hb_001825_050 Hb_007694_030 Hb_007694_030 Hb_001825_050--Hb_007694_030 Hb_004800_110 Hb_004800_110 Hb_001825_050--Hb_004800_110 Hb_002710_020 Hb_002710_020 Hb_001825_050--Hb_002710_020 Hb_000224_110 Hb_000224_110 Hb_001825_050--Hb_000224_110 Hb_003811_010 Hb_003811_010 Hb_001825_050--Hb_003811_010 Hb_002485_020 Hb_002485_020 Hb_001825_050--Hb_002485_020 Hb_007694_030--Hb_002710_020 Hb_007694_030--Hb_004800_110 Hb_000069_080 Hb_000069_080 Hb_007694_030--Hb_000069_080 Hb_002835_130 Hb_002835_130 Hb_007694_030--Hb_002835_130 Hb_007694_030--Hb_003811_010 Hb_004800_110--Hb_002710_020 Hb_004800_110--Hb_003811_010 Hb_004800_110--Hb_000069_080 Hb_004800_110--Hb_002485_020 Hb_004800_110--Hb_002835_130 Hb_002710_020--Hb_000069_080 Hb_002710_020--Hb_003811_010 Hb_002710_020--Hb_002835_130 Hb_002710_020--Hb_002485_020 Hb_000224_110--Hb_002835_130 Hb_000224_110--Hb_007694_030 Hb_010863_040 Hb_010863_040 Hb_000224_110--Hb_010863_040 Hb_000224_110--Hb_000069_080 Hb_000224_110--Hb_002710_020 Hb_003811_010--Hb_002485_020 Hb_003811_010--Hb_000069_080 Hb_002485_020--Hb_007694_030 Hb_002485_020--Hb_000069_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.35024 0 0.873929 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.536069 0

CAGE analysis