Hb_000224_110

Information

Type -
Description -
Location Contig224: 65899-67217
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000224_110 0.0 - - -
2 Hb_001825_050 0.2015741396 - - -
3 Hb_002835_130 0.2225573794 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
4 Hb_007694_030 0.2290210222 - - hypothetical protein SORBIDRAFT_04g037485 [Sorghum bicolor]
5 Hb_010863_040 0.2316135893 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
6 Hb_000069_080 0.2322587596 - - PREDICTED: laccase-6 [Jatropha curcas]
7 Hb_002710_020 0.2474970017 - - -
8 Hb_004800_110 0.2519811602 - - PREDICTED: proline-rich receptor-like protein kinase PERK4 [Jatropha curcas]
9 Hb_001189_160 0.2818775163 - - -
10 Hb_001743_080 0.2828767817 - - -
11 Hb_000349_130 0.2830230845 - - hypothetical protein JCGZ_06349 [Jatropha curcas]
12 Hb_003850_030 0.283886565 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
13 Hb_001240_030 0.284401028 - - PREDICTED: uncharacterized protein LOC105634453 [Jatropha curcas]
14 Hb_002326_160 0.2844520953 - - hypothetical protein JCGZ_04332 [Jatropha curcas]
15 Hb_150093_010 0.2844763816 - - putative polyprotein [Oryza sativa Japonica Group]
16 Hb_188247_020 0.284508038 - - hypothetical protein, partial [Cecembia lonarensis]
17 Hb_000518_010 0.2845382714 transcription factor TF Family: MYB hypothetical protein POPTR_0010s17300g [Populus trichocarpa]
18 Hb_001900_040 0.2845555552 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
19 Hb_163720_010 0.2847824895 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
20 Hb_073174_010 0.2848902203 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]

Gene co-expression network

sample Hb_000224_110 Hb_000224_110 Hb_001825_050 Hb_001825_050 Hb_000224_110--Hb_001825_050 Hb_002835_130 Hb_002835_130 Hb_000224_110--Hb_002835_130 Hb_007694_030 Hb_007694_030 Hb_000224_110--Hb_007694_030 Hb_010863_040 Hb_010863_040 Hb_000224_110--Hb_010863_040 Hb_000069_080 Hb_000069_080 Hb_000224_110--Hb_000069_080 Hb_002710_020 Hb_002710_020 Hb_000224_110--Hb_002710_020 Hb_001825_050--Hb_007694_030 Hb_004800_110 Hb_004800_110 Hb_001825_050--Hb_004800_110 Hb_001825_050--Hb_002710_020 Hb_003811_010 Hb_003811_010 Hb_001825_050--Hb_003811_010 Hb_002485_020 Hb_002485_020 Hb_001825_050--Hb_002485_020 Hb_002835_130--Hb_010863_040 Hb_002835_130--Hb_000069_080 Hb_002835_130--Hb_007694_030 Hb_002835_130--Hb_002710_020 Hb_002835_130--Hb_004800_110 Hb_007694_030--Hb_002710_020 Hb_007694_030--Hb_004800_110 Hb_007694_030--Hb_000069_080 Hb_007694_030--Hb_003811_010 Hb_010863_040--Hb_000069_080 Hb_010863_040--Hb_002710_020 Hb_010863_040--Hb_007694_030 Hb_010863_040--Hb_004800_110 Hb_000069_080--Hb_002710_020 Hb_000069_080--Hb_004800_110 Hb_002710_020--Hb_004800_110 Hb_002710_020--Hb_003811_010 Hb_002710_020--Hb_002485_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.159973 0 0.0490596 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.118733 0

CAGE analysis