Hb_002710_020

Information

Type -
Description -
Location Contig2710: 26290-27463
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002710_020 0.0 - - -
2 Hb_004800_110 0.0063099871 - - PREDICTED: proline-rich receptor-like protein kinase PERK4 [Jatropha curcas]
3 Hb_007694_030 0.0203958793 - - hypothetical protein SORBIDRAFT_04g037485 [Sorghum bicolor]
4 Hb_000069_080 0.1306218736 - - PREDICTED: laccase-6 [Jatropha curcas]
5 Hb_003811_010 0.1330828246 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
6 Hb_002835_130 0.142851321 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
7 Hb_002485_020 0.1437159852 - - metal transport family protein [Populus trichocarpa]
8 Hb_010863_040 0.1534701814 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
9 Hb_001825_050 0.1653220161 - - -
10 Hb_000224_110 0.2474970017 - - -
11 Hb_001369_310 0.3185356876 - - tonoplast intrinsic protein, putative [Ricinus communis]
12 Hb_030736_110 0.3193831247 - - -
13 Hb_143643_010 0.359384114 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC103967596 [Pyrus x bretschneideri]
14 Hb_151497_010 0.3648112491 - - -
15 Hb_005803_020 0.3655700694 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
16 Hb_007101_220 0.3750142416 - - Gibberellin-regulated protein 3 precursor, putative [Ricinus communis]
17 Hb_000230_070 0.393036198 - - Galactose oxidase precursor, putative [Ricinus communis]
18 Hb_003866_010 0.4083662239 - - Polyprotein, putative [Solanum demissum]
19 Hb_000445_340 0.4084391479 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000053_090 0.408520414 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Populus euphratica]

Gene co-expression network

sample Hb_002710_020 Hb_002710_020 Hb_004800_110 Hb_004800_110 Hb_002710_020--Hb_004800_110 Hb_007694_030 Hb_007694_030 Hb_002710_020--Hb_007694_030 Hb_000069_080 Hb_000069_080 Hb_002710_020--Hb_000069_080 Hb_003811_010 Hb_003811_010 Hb_002710_020--Hb_003811_010 Hb_002835_130 Hb_002835_130 Hb_002710_020--Hb_002835_130 Hb_002485_020 Hb_002485_020 Hb_002710_020--Hb_002485_020 Hb_004800_110--Hb_007694_030 Hb_004800_110--Hb_003811_010 Hb_004800_110--Hb_000069_080 Hb_004800_110--Hb_002485_020 Hb_004800_110--Hb_002835_130 Hb_007694_030--Hb_000069_080 Hb_007694_030--Hb_002835_130 Hb_001825_050 Hb_001825_050 Hb_007694_030--Hb_001825_050 Hb_007694_030--Hb_003811_010 Hb_000069_080--Hb_002835_130 Hb_010863_040 Hb_010863_040 Hb_000069_080--Hb_010863_040 Hb_000224_110 Hb_000224_110 Hb_000069_080--Hb_000224_110 Hb_003811_010--Hb_002485_020 Hb_003811_010--Hb_000069_080 Hb_003811_010--Hb_001825_050 Hb_002835_130--Hb_010863_040 Hb_002835_130--Hb_000224_110 Hb_002485_020--Hb_007694_030 Hb_002485_020--Hb_000069_080 Hb_002485_020--Hb_001825_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0289863 0 0.0384442 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0283778 0

CAGE analysis