Hb_026048_060

Information

Type -
Description -
Location Contig26048: 89690-93382
Sequence    

Annotation

kegg
ID rcu:RCOM_1689360
description hydrolase, hydrolyzing O-glycosyl compounds, putative
nr
ID XP_002509877.1
description hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
swissprot
ID P54583
description Endoglucanase E1 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=Acel_0614 PE=1 SV=1
trembl
ID B9RCJ3
description Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_1689360 PE=3 SV=1
Gene Ontology
ID GO:0004553
description hydrolyzing o-glycosyl

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026048_060 0.0 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
2 Hb_000010_100 0.2337962531 - - hypothetical protein POPTR_0016s14440g [Populus trichocarpa]
3 Hb_000192_110 0.2822381601 - - PREDICTED: uncharacterized protein LOC105646856 [Jatropha curcas]
4 Hb_000876_040 0.2873613073 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
5 Hb_001956_030 0.287874741 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Populus euphratica]
6 Hb_096671_010 0.290088291 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
7 Hb_000904_100 0.2902870517 - - hypothetical protein JCGZ_03883 [Jatropha curcas]
8 Hb_071586_010 0.3008290301 - - PREDICTED: uncharacterized protein LOC105632410 [Jatropha curcas]
9 Hb_001462_020 0.30087301 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
10 Hb_089173_010 0.3037582644 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
11 Hb_006806_010 0.3080127584 - - -
12 Hb_018464_060 0.3172030875 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_005285_010 0.3196521707 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
14 Hb_002232_090 0.319652406 - - STS14 protein precursor, putative [Ricinus communis]
15 Hb_008246_050 0.320907453 - - -
16 Hb_005799_040 0.32090966 - - PREDICTED: bidirectional sugar transporter SWEET4-like isoform X1 [Gossypium raimondii]
17 Hb_048874_010 0.3212647592 - - hypothetical protein POPTR_0016s10870g [Populus trichocarpa]
18 Hb_169574_010 0.3214398656 - - PREDICTED: uncharacterized protein LOC104120373 [Nicotiana tomentosiformis]
19 Hb_162126_010 0.3234476952 - - -
20 Hb_000304_060 0.3246976377 transcription factor TF Family: GRAS hypothetical protein POPTR_0010s15360g [Populus trichocarpa]

Gene co-expression network

sample Hb_026048_060 Hb_026048_060 Hb_000010_100 Hb_000010_100 Hb_026048_060--Hb_000010_100 Hb_000192_110 Hb_000192_110 Hb_026048_060--Hb_000192_110 Hb_000876_040 Hb_000876_040 Hb_026048_060--Hb_000876_040 Hb_001956_030 Hb_001956_030 Hb_026048_060--Hb_001956_030 Hb_096671_010 Hb_096671_010 Hb_026048_060--Hb_096671_010 Hb_000904_100 Hb_000904_100 Hb_026048_060--Hb_000904_100 Hb_012586_030 Hb_012586_030 Hb_000010_100--Hb_012586_030 Hb_001143_260 Hb_001143_260 Hb_000010_100--Hb_001143_260 Hb_002513_050 Hb_002513_050 Hb_000010_100--Hb_002513_050 Hb_000184_200 Hb_000184_200 Hb_000010_100--Hb_000184_200 Hb_003799_020 Hb_003799_020 Hb_000010_100--Hb_003799_020 Hb_015970_010 Hb_015970_010 Hb_000192_110--Hb_015970_010 Hb_003055_170 Hb_003055_170 Hb_000192_110--Hb_003055_170 Hb_011437_030 Hb_011437_030 Hb_000192_110--Hb_011437_030 Hb_001976_080 Hb_001976_080 Hb_000192_110--Hb_001976_080 Hb_000000_100 Hb_000000_100 Hb_000192_110--Hb_000000_100 Hb_000876_040--Hb_002513_050 Hb_168311_010 Hb_168311_010 Hb_000876_040--Hb_168311_010 Hb_125847_010 Hb_125847_010 Hb_000876_040--Hb_125847_010 Hb_000876_040--Hb_001143_260 Hb_000139_440 Hb_000139_440 Hb_000876_040--Hb_000139_440 Hb_000430_010 Hb_000430_010 Hb_000876_040--Hb_000430_010 Hb_054362_010 Hb_054362_010 Hb_001956_030--Hb_054362_010 Hb_127993_010 Hb_127993_010 Hb_001956_030--Hb_127993_010 Hb_169574_010 Hb_169574_010 Hb_001956_030--Hb_169574_010 Hb_089173_010 Hb_089173_010 Hb_001956_030--Hb_089173_010 Hb_048874_010 Hb_048874_010 Hb_001956_030--Hb_048874_010 Hb_005799_040 Hb_005799_040 Hb_001956_030--Hb_005799_040 Hb_096671_010--Hb_000904_100 Hb_001462_020 Hb_001462_020 Hb_096671_010--Hb_001462_020 Hb_071586_010 Hb_071586_010 Hb_096671_010--Hb_071586_010 Hb_096671_010--Hb_001956_030 Hb_096671_010--Hb_089173_010 Hb_003777_010 Hb_003777_010 Hb_096671_010--Hb_003777_010 Hb_000904_100--Hb_001462_020 Hb_000904_100--Hb_071586_010 Hb_000904_100--Hb_001956_030 Hb_000904_100--Hb_089173_010 Hb_000904_100--Hb_003777_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00977933 0.0080707 0.00764705 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0663425 0.0417346 0

CAGE analysis