Hb_019845_010

Information

Type -
Description -
Location Contig19845: 4642-4980
Sequence    

Annotation

kegg
ID mdm:103453403
description glu S.griseus protease inhibitor-like
nr
ID ABZ88804.1
description protease inhibitor protein [Hevea brasiliensis]
swissprot
ID Q6XNP7
description Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2
trembl
ID B3FNP9
description Protease inhibitor protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0004867
description serine protease inhibitor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019845_010 0.0 - - protease inhibitor protein [Hevea brasiliensis]
2 Hb_000879_220 0.1697302438 - - PREDICTED: probable metal-nicotianamine transporter YSL7 [Jatropha curcas]
3 Hb_002968_050 0.1861558293 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
4 Hb_003377_010 0.1864479265 - - hypothetical protein POPTR_0016s06140g, partial [Populus trichocarpa]
5 Hb_003261_010 0.1889075745 - - hypothetical protein POPTR_0067s00200g [Populus trichocarpa]
6 Hb_001959_100 0.1904262295 - - ammonium transporter, putative [Ricinus communis]
7 Hb_000340_240 0.1981846655 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003171_080 0.2005595294 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001213_110 0.2031901409 - - SOUL heme-binding family protein [Populus trichocarpa]
10 Hb_002960_180 0.2044189245 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
11 Hb_000220_060 0.2071601633 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 15 [Jatropha curcas]
12 Hb_099263_010 0.2080812934 - - hypothetical protein AALP_AAs50029U000400 [Arabis alpina]
13 Hb_094074_010 0.2090014136 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
14 Hb_005991_030 0.2090830861 - - copper ion binding protein, putative [Ricinus communis]
15 Hb_002929_040 0.2097145279 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000329_580 0.2107402562 - - malate dehydrogenase, putative [Ricinus communis]
17 Hb_011214_080 0.2129447471 - - sucrose synthase 1 [Hevea brasiliensis]
18 Hb_034299_010 0.2129510908 - - F-box and wd40 domain protein, putative [Ricinus communis]
19 Hb_002042_220 0.2148742031 - - Kinesin heavy chain, putative [Ricinus communis]
20 Hb_000007_290 0.2151259776 - - hypothetical protein AALP_AAs43195U000200 [Arabis alpina]

Gene co-expression network

sample Hb_019845_010 Hb_019845_010 Hb_000879_220 Hb_000879_220 Hb_019845_010--Hb_000879_220 Hb_002968_050 Hb_002968_050 Hb_019845_010--Hb_002968_050 Hb_003377_010 Hb_003377_010 Hb_019845_010--Hb_003377_010 Hb_003261_010 Hb_003261_010 Hb_019845_010--Hb_003261_010 Hb_001959_100 Hb_001959_100 Hb_019845_010--Hb_001959_100 Hb_000340_240 Hb_000340_240 Hb_019845_010--Hb_000340_240 Hb_001213_110 Hb_001213_110 Hb_000879_220--Hb_001213_110 Hb_000879_220--Hb_001959_100 Hb_001478_030 Hb_001478_030 Hb_000879_220--Hb_001478_030 Hb_002119_150 Hb_002119_150 Hb_000879_220--Hb_002119_150 Hb_000879_220--Hb_000340_240 Hb_002968_050--Hb_003261_010 Hb_000200_360 Hb_000200_360 Hb_002968_050--Hb_000200_360 Hb_002968_050--Hb_001959_100 Hb_000510_280 Hb_000510_280 Hb_002968_050--Hb_000510_280 Hb_000264_040 Hb_000264_040 Hb_002968_050--Hb_000264_040 Hb_004586_270 Hb_004586_270 Hb_002968_050--Hb_004586_270 Hb_003377_010--Hb_001213_110 Hb_003377_010--Hb_003261_010 Hb_000329_580 Hb_000329_580 Hb_003377_010--Hb_000329_580 Hb_003377_010--Hb_000879_220 Hb_000329_520 Hb_000329_520 Hb_003377_010--Hb_000329_520 Hb_003261_010--Hb_001959_100 Hb_003261_010--Hb_000340_240 Hb_003261_010--Hb_000200_360 Hb_000220_060 Hb_000220_060 Hb_003261_010--Hb_000220_060 Hb_003261_010--Hb_000329_580 Hb_001959_100--Hb_000340_240 Hb_012760_120 Hb_012760_120 Hb_001959_100--Hb_012760_120 Hb_001959_100--Hb_000200_360 Hb_000538_110 Hb_000538_110 Hb_001959_100--Hb_000538_110 Hb_000227_100 Hb_000227_100 Hb_001959_100--Hb_000227_100 Hb_011214_080 Hb_011214_080 Hb_001959_100--Hb_011214_080 Hb_000340_240--Hb_012760_120 Hb_000340_240--Hb_000220_060 Hb_000340_240--Hb_000538_110 Hb_010738_020 Hb_010738_020 Hb_000340_240--Hb_010738_020 Hb_000340_240--Hb_011214_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.0722 7.06191 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.930085 1.48861 0 0 19.2758

CAGE analysis