Hb_015609_020

Information

Type -
Description -
Location Contig15609: 12594-13058
Sequence    

Annotation

kegg
ID vvi:100242238
description uncharacterized LOC100242238
nr
ID XP_012083107.1
description PREDICTED: uncharacterized protein LOC105642775 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LAJ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09745 PE=4 SV=1
Gene Ontology
ID GO:0043231
description PREDICTED: uncharacterized protein LOC105642775

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015609_020 0.0 - - PREDICTED: uncharacterized protein LOC105642775 [Jatropha curcas]
2 Hb_006502_080 0.2041838053 - - -
3 Hb_032927_010 0.247687683 - - -
4 Hb_000347_510 0.2526386132 - - actin binding protein, putative [Ricinus communis]
5 Hb_075136_010 0.2532010275 - - Protein SSU72, putative [Ricinus communis]
6 Hb_000413_160 0.2556395789 - - PREDICTED: uncharacterized protein LOC105649406 isoform X2 [Jatropha curcas]
7 Hb_000329_770 0.2562253088 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000812_040 0.257357597 - - zinc finger family protein [Populus trichocarpa]
9 Hb_000703_260 0.257707548 - - N-acetylglucosamine kinase, putative [Ricinus communis]
10 Hb_096490_020 0.2615529259 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]
11 Hb_000948_190 0.2619926271 transcription factor TF Family: GNAT Glucosamine 6-phosphate N-acetyltransferase, putative [Ricinus communis]
12 Hb_136731_010 0.2655993755 - - PREDICTED: uncharacterized protein LOC105628378 isoform X4 [Jatropha curcas]
13 Hb_032225_020 0.2677219438 - - hypothetical protein POPTR_0006s08140g [Populus trichocarpa]
14 Hb_000101_090 0.268966307 - - PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Camelina sativa]
15 Hb_000414_030 0.2698757025 - - -
16 Hb_028341_010 0.2708496727 - - hypothetical protein CICLE_v10026841mg [Citrus clementina]
17 Hb_007229_070 0.2719536863 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]
18 Hb_106005_010 0.2754735014 - - EG5651 [Manihot esculenta]
19 Hb_001054_130 0.2755501835 - - Protein SSU72, putative [Ricinus communis]
20 Hb_005895_030 0.2768635437 - - PREDICTED: uncharacterized protein LOC105643388 [Jatropha curcas]

Gene co-expression network

sample Hb_015609_020 Hb_015609_020 Hb_006502_080 Hb_006502_080 Hb_015609_020--Hb_006502_080 Hb_032927_010 Hb_032927_010 Hb_015609_020--Hb_032927_010 Hb_000347_510 Hb_000347_510 Hb_015609_020--Hb_000347_510 Hb_075136_010 Hb_075136_010 Hb_015609_020--Hb_075136_010 Hb_000413_160 Hb_000413_160 Hb_015609_020--Hb_000413_160 Hb_000329_770 Hb_000329_770 Hb_015609_020--Hb_000329_770 Hb_006502_080--Hb_032927_010 Hb_000812_040 Hb_000812_040 Hb_006502_080--Hb_000812_040 Hb_007012_020 Hb_007012_020 Hb_006502_080--Hb_007012_020 Hb_136731_010 Hb_136731_010 Hb_006502_080--Hb_136731_010 Hb_067776_010 Hb_067776_010 Hb_006502_080--Hb_067776_010 Hb_006502_080--Hb_000329_770 Hb_032927_010--Hb_000812_040 Hb_032927_010--Hb_067776_010 Hb_007188_020 Hb_007188_020 Hb_032927_010--Hb_007188_020 Hb_152554_010 Hb_152554_010 Hb_032927_010--Hb_152554_010 Hb_032927_010--Hb_136731_010 Hb_000414_030 Hb_000414_030 Hb_000347_510--Hb_000414_030 Hb_000832_240 Hb_000832_240 Hb_000347_510--Hb_000832_240 Hb_068946_010 Hb_068946_010 Hb_000347_510--Hb_068946_010 Hb_120221_010 Hb_120221_010 Hb_000347_510--Hb_120221_010 Hb_080147_090 Hb_080147_090 Hb_000347_510--Hb_080147_090 Hb_003746_060 Hb_003746_060 Hb_000347_510--Hb_003746_060 Hb_075136_010--Hb_000413_160 Hb_000703_260 Hb_000703_260 Hb_075136_010--Hb_000703_260 Hb_075136_010--Hb_006502_080 Hb_002849_040 Hb_002849_040 Hb_075136_010--Hb_002849_040 Hb_005731_140 Hb_005731_140 Hb_075136_010--Hb_005731_140 Hb_000648_030 Hb_000648_030 Hb_075136_010--Hb_000648_030 Hb_000413_160--Hb_002849_040 Hb_005656_050 Hb_005656_050 Hb_000413_160--Hb_005656_050 Hb_000493_010 Hb_000493_010 Hb_000413_160--Hb_000493_010 Hb_000413_160--Hb_006502_080 Hb_000413_160--Hb_000648_030 Hb_015057_010 Hb_015057_010 Hb_000329_770--Hb_015057_010 Hb_011016_090 Hb_011016_090 Hb_000329_770--Hb_011016_090 Hb_002259_150 Hb_002259_150 Hb_000329_770--Hb_002259_150 Hb_000380_010 Hb_000380_010 Hb_000329_770--Hb_000380_010 Hb_028639_050 Hb_028639_050 Hb_000329_770--Hb_028639_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.885246 0.571086 5.3097 0.491247 1.50143 14.057
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.79045 5.24031 3.3757 1.59636 0.218829

CAGE analysis