Hb_011485_040

Information

Type -
Description -
Location Contig11485: 48406-52160
Sequence    

Annotation

kegg
ID rcu:RCOM_0213230
description Protein brittle-1, chloroplast precursor, putative
nr
ID XP_012088995.1
description PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Jatropha curcas]
swissprot
ID Q9LV81
description Probable mitochondrial adenine nucleotide transporter BTL3 OS=Arabidopsis thaliana GN=At5g64970 PE=2 SV=1
trembl
ID A0A067LQI4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24033 PE=3 SV=1
Gene Ontology
ID GO:0009536
description probable mitochondrial adenine nucleotide transporter btl3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04478: 48398-51093 , PASA_asmbl_04479: 51207-52039
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011485_040 0.0 - - PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Jatropha curcas]
2 Hb_001502_070 0.1386909205 - - X-linked inhibitor of apoptosis protein, xiap, putative [Ricinus communis]
3 Hb_004226_020 0.14367769 - - -
4 Hb_021443_070 0.1562084223 - - PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Jatropha curcas]
5 Hb_003656_110 0.1596816945 - - phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
6 Hb_000028_040 0.1612143492 - - PREDICTED: prostaglandin E synthase 2-like [Jatropha curcas]
7 Hb_000028_220 0.1688846556 - - PREDICTED: dnaJ protein homolog 2 [Jatropha curcas]
8 Hb_002872_020 0.1708786839 - - WD-repeat protein, putative [Ricinus communis]
9 Hb_001421_020 0.1713100172 - - hypothetical protein F383_00667 [Gossypium arboreum]
10 Hb_008322_010 0.1726189144 - - PREDICTED: DNA repair protein RAD51 homolog 3 [Jatropha curcas]
11 Hb_008643_100 0.1728063745 - - PREDICTED: uncharacterized protein LOC105629528 [Jatropha curcas]
12 Hb_000402_200 0.174888242 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
13 Hb_132835_010 0.1763905464 - - PREDICTED: RING-H2 finger protein ATL8-like isoform X2 [Jatropha curcas]
14 Hb_000160_170 0.1774499298 - - hypothetical protein JCGZ_02506 [Jatropha curcas]
15 Hb_028872_050 0.179017935 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Jatropha curcas]
16 Hb_003963_010 0.1790606703 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002014_100 0.1792033019 - - sugar transporter, putative [Ricinus communis]
18 Hb_000659_030 0.1796897249 - - pollen Ole e 1 allergen and extensin family protein, partial [Manihot esculenta]
19 Hb_015978_060 0.1801421263 - - unnamed protein product [Vitis vinifera]
20 Hb_001322_170 0.1806893068 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_011485_040 Hb_011485_040 Hb_001502_070 Hb_001502_070 Hb_011485_040--Hb_001502_070 Hb_004226_020 Hb_004226_020 Hb_011485_040--Hb_004226_020 Hb_021443_070 Hb_021443_070 Hb_011485_040--Hb_021443_070 Hb_003656_110 Hb_003656_110 Hb_011485_040--Hb_003656_110 Hb_000028_040 Hb_000028_040 Hb_011485_040--Hb_000028_040 Hb_000028_220 Hb_000028_220 Hb_011485_040--Hb_000028_220 Hb_001421_020 Hb_001421_020 Hb_001502_070--Hb_001421_020 Hb_001502_070--Hb_021443_070 Hb_001221_410 Hb_001221_410 Hb_001502_070--Hb_001221_410 Hb_002149_020 Hb_002149_020 Hb_001502_070--Hb_002149_020 Hb_015978_060 Hb_015978_060 Hb_001502_070--Hb_015978_060 Hb_009838_090 Hb_009838_090 Hb_001502_070--Hb_009838_090 Hb_004968_100 Hb_004968_100 Hb_004226_020--Hb_004968_100 Hb_034299_060 Hb_034299_060 Hb_004226_020--Hb_034299_060 Hb_005357_150 Hb_005357_150 Hb_004226_020--Hb_005357_150 Hb_163145_020 Hb_163145_020 Hb_004226_020--Hb_163145_020 Hb_000429_170 Hb_000429_170 Hb_004226_020--Hb_000429_170 Hb_002973_080 Hb_002973_080 Hb_004226_020--Hb_002973_080 Hb_004440_090 Hb_004440_090 Hb_021443_070--Hb_004440_090 Hb_000160_170 Hb_000160_170 Hb_021443_070--Hb_000160_170 Hb_000015_080 Hb_000015_080 Hb_021443_070--Hb_000015_080 Hb_012340_080 Hb_012340_080 Hb_021443_070--Hb_012340_080 Hb_000046_280 Hb_000046_280 Hb_021443_070--Hb_000046_280 Hb_004735_040 Hb_004735_040 Hb_021443_070--Hb_004735_040 Hb_032202_170 Hb_032202_170 Hb_003656_110--Hb_032202_170 Hb_003656_110--Hb_000028_040 Hb_003097_190 Hb_003097_190 Hb_003656_110--Hb_003097_190 Hb_004512_020 Hb_004512_020 Hb_003656_110--Hb_004512_020 Hb_011457_160 Hb_011457_160 Hb_003656_110--Hb_011457_160 Hb_002890_180 Hb_002890_180 Hb_003656_110--Hb_002890_180 Hb_000028_040--Hb_004512_020 Hb_002872_020 Hb_002872_020 Hb_000028_040--Hb_002872_020 Hb_011344_010 Hb_011344_010 Hb_000028_040--Hb_011344_010 Hb_001427_170 Hb_001427_170 Hb_000028_040--Hb_001427_170 Hb_000352_110 Hb_000352_110 Hb_000028_040--Hb_000352_110 Hb_008322_010 Hb_008322_010 Hb_000028_220--Hb_008322_010 Hb_000028_220--Hb_001502_070 Hb_009803_040 Hb_009803_040 Hb_000028_220--Hb_009803_040 Hb_000331_290 Hb_000331_290 Hb_000028_220--Hb_000331_290 Hb_006634_040 Hb_006634_040 Hb_000028_220--Hb_006634_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.2148 20.7402 8.93769 19.6225 91.6294 21.0093
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
62.5332 31.0389 42.1648 13.7137 19.3591

CAGE analysis