Hb_011457_160

Information

Type -
Description -
Location Contig11457: 120855-127317
Sequence    

Annotation

kegg
ID tcc:TCM_004291
description Bax inhibitor-1 family protein
nr
ID XP_012092178.1
description PREDICTED: BI1-like protein [Jatropha curcas]
swissprot
ID Q94A20
description BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1
trembl
ID A0A0D9W044
description Uncharacterized protein OS=Leersia perrieri PE=4 SV=1
Gene Ontology
ID GO:0016021
description bi1-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04417: 123140-123420
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011457_160 0.0 - - PREDICTED: BI1-like protein [Jatropha curcas]
2 Hb_002311_250 0.1369113999 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
3 Hb_003656_110 0.1412394319 - - phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
4 Hb_000028_040 0.1595746579 - - PREDICTED: prostaglandin E synthase 2-like [Jatropha curcas]
5 Hb_011344_010 0.1635458699 - - PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Jatropha curcas]
6 Hb_004645_040 0.1856568878 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
7 Hb_002239_040 0.1868814191 - - Cellular apoptosis susceptibility protein / importin-alpha re-exporter, putative isoform 1 [Theobroma cacao]
8 Hb_011485_040 0.1948653377 - - PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Jatropha curcas]
9 Hb_001427_170 0.2004577511 - - PREDICTED: 40S ribosomal protein S15a-5-like [Populus euphratica]
10 Hb_000397_070 0.2034276635 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
11 Hb_001341_040 0.2041539672 - - hypothetical protein JCGZ_05578 [Jatropha curcas]
12 Hb_009680_030 0.2061380616 - - PREDICTED: heat shock protein 83-like [Jatropha curcas]
13 Hb_003097_190 0.2087270028 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 3 [Jatropha curcas]
14 Hb_004512_020 0.2095691362 - - PREDICTED: tetratricopeptide repeat protein 1 [Jatropha curcas]
15 Hb_106321_030 0.2108200133 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Jatropha curcas]
16 Hb_011004_020 0.2159755269 - - PREDICTED: pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Jatropha curcas]
17 Hb_002374_440 0.2186667319 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003209_020 0.2196725522 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Jatropha curcas]
19 Hb_048985_010 0.2197199904 - - -
20 Hb_005228_110 0.2232310252 - - Cleavage and polyadenylation specificity factor subunit 3 [Fukomys damarensis]

Gene co-expression network

sample Hb_011457_160 Hb_011457_160 Hb_002311_250 Hb_002311_250 Hb_011457_160--Hb_002311_250 Hb_003656_110 Hb_003656_110 Hb_011457_160--Hb_003656_110 Hb_000028_040 Hb_000028_040 Hb_011457_160--Hb_000028_040 Hb_011344_010 Hb_011344_010 Hb_011457_160--Hb_011344_010 Hb_004645_040 Hb_004645_040 Hb_011457_160--Hb_004645_040 Hb_002239_040 Hb_002239_040 Hb_011457_160--Hb_002239_040 Hb_001946_360 Hb_001946_360 Hb_002311_250--Hb_001946_360 Hb_002311_250--Hb_011344_010 Hb_002374_440 Hb_002374_440 Hb_002311_250--Hb_002374_440 Hb_002311_250--Hb_002239_040 Hb_009680_030 Hb_009680_030 Hb_002311_250--Hb_009680_030 Hb_032202_170 Hb_032202_170 Hb_003656_110--Hb_032202_170 Hb_003656_110--Hb_000028_040 Hb_003097_190 Hb_003097_190 Hb_003656_110--Hb_003097_190 Hb_004512_020 Hb_004512_020 Hb_003656_110--Hb_004512_020 Hb_002890_180 Hb_002890_180 Hb_003656_110--Hb_002890_180 Hb_000028_040--Hb_004512_020 Hb_002872_020 Hb_002872_020 Hb_000028_040--Hb_002872_020 Hb_000028_040--Hb_011344_010 Hb_001427_170 Hb_001427_170 Hb_000028_040--Hb_001427_170 Hb_000352_110 Hb_000352_110 Hb_000028_040--Hb_000352_110 Hb_011344_010--Hb_001427_170 Hb_001341_040 Hb_001341_040 Hb_011344_010--Hb_001341_040 Hb_001040_170 Hb_001040_170 Hb_011344_010--Hb_001040_170 Hb_002997_100 Hb_002997_100 Hb_011344_010--Hb_002997_100 Hb_001057_010 Hb_001057_010 Hb_011344_010--Hb_001057_010 Hb_000733_060 Hb_000733_060 Hb_011344_010--Hb_000733_060 Hb_004374_050 Hb_004374_050 Hb_004645_040--Hb_004374_050 Hb_000300_380 Hb_000300_380 Hb_004645_040--Hb_000300_380 Hb_001769_020 Hb_001769_020 Hb_004645_040--Hb_001769_020 Hb_004645_040--Hb_001427_170 Hb_004645_040--Hb_011344_010 Hb_000406_040 Hb_000406_040 Hb_002239_040--Hb_000406_040 Hb_002239_040--Hb_003656_110 Hb_002239_040--Hb_003097_190 Hb_006816_170 Hb_006816_170 Hb_002239_040--Hb_006816_170 Hb_000152_560 Hb_000152_560 Hb_002239_040--Hb_000152_560
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.54926 12.1981 1.46295 6.97852 75.7249 14.789
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.8901 24.0267 32.0714 7.09916 7.68405

CAGE analysis