Hb_009680_030

Information

Type -
Description -
Location Contig9680: 25388-28710
Sequence    

Annotation

kegg
ID atr:s00001p00118120
description AMTR_s00001p00118120; hypothetical protein
nr
ID XP_012086831.1
description PREDICTED: heat shock protein 83-like [Jatropha curcas]
swissprot
ID P51819
description Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1
trembl
ID A0A067JZF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20546 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009680_030 0.0 - - PREDICTED: heat shock protein 83-like [Jatropha curcas]
2 Hb_006846_090 0.1211031973 - - PREDICTED: uncharacterized protein LOC105648695 [Jatropha curcas]
3 Hb_002983_020 0.1447486444 - - PREDICTED: probable disease resistance protein At5g63020 [Populus euphratica]
4 Hb_019153_040 0.1588517453 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
5 Hb_002311_250 0.166252984 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
6 Hb_010931_110 0.1838188798 - - ubiquitin-protein ligase, putative [Ricinus communis]
7 Hb_000300_530 0.1879195584 - - PREDICTED: uncharacterized protein DDB_G0286299-like [Gossypium raimondii]
8 Hb_003125_050 0.1929622618 - - PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Jatropha curcas]
9 Hb_029388_040 0.1949810916 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
10 Hb_164732_010 0.1951708962 - - -
11 Hb_004645_040 0.1983736287 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
12 Hb_098315_110 0.198610132 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000317_080 0.1988888901 - - PREDICTED: probable galacturonosyltransferase 10 [Jatropha curcas]
14 Hb_003768_040 0.2028696618 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_011457_160 0.2061380616 - - PREDICTED: BI1-like protein [Jatropha curcas]
16 Hb_002374_440 0.2064450321 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001341_040 0.2070312371 - - hypothetical protein JCGZ_05578 [Jatropha curcas]
18 Hb_004032_240 0.2077674256 - - electron transporter, putative [Ricinus communis]
19 Hb_034083_010 0.2082862783 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008376_010 0.2106819458 - - -

Gene co-expression network

sample Hb_009680_030 Hb_009680_030 Hb_006846_090 Hb_006846_090 Hb_009680_030--Hb_006846_090 Hb_002983_020 Hb_002983_020 Hb_009680_030--Hb_002983_020 Hb_019153_040 Hb_019153_040 Hb_009680_030--Hb_019153_040 Hb_002311_250 Hb_002311_250 Hb_009680_030--Hb_002311_250 Hb_010931_110 Hb_010931_110 Hb_009680_030--Hb_010931_110 Hb_000300_530 Hb_000300_530 Hb_009680_030--Hb_000300_530 Hb_006846_090--Hb_002983_020 Hb_006846_090--Hb_002311_250 Hb_000317_080 Hb_000317_080 Hb_006846_090--Hb_000317_080 Hb_029388_040 Hb_029388_040 Hb_006846_090--Hb_029388_040 Hb_164732_010 Hb_164732_010 Hb_006846_090--Hb_164732_010 Hb_002983_020--Hb_019153_040 Hb_002983_020--Hb_000300_530 Hb_003125_050 Hb_003125_050 Hb_002983_020--Hb_003125_050 Hb_002983_020--Hb_010931_110 Hb_053543_010 Hb_053543_010 Hb_002983_020--Hb_053543_010 Hb_019153_040--Hb_164732_010 Hb_004032_240 Hb_004032_240 Hb_019153_040--Hb_004032_240 Hb_019153_040--Hb_010931_110 Hb_008376_010 Hb_008376_010 Hb_019153_040--Hb_008376_010 Hb_011457_160 Hb_011457_160 Hb_002311_250--Hb_011457_160 Hb_001946_360 Hb_001946_360 Hb_002311_250--Hb_001946_360 Hb_011344_010 Hb_011344_010 Hb_002311_250--Hb_011344_010 Hb_002374_440 Hb_002374_440 Hb_002311_250--Hb_002374_440 Hb_002239_040 Hb_002239_040 Hb_002311_250--Hb_002239_040 Hb_130177_010 Hb_130177_010 Hb_010931_110--Hb_130177_010 Hb_001198_090 Hb_001198_090 Hb_010931_110--Hb_001198_090 Hb_143629_050 Hb_143629_050 Hb_010931_110--Hb_143629_050 Hb_010931_110--Hb_004032_240 Hb_000987_050 Hb_000987_050 Hb_010931_110--Hb_000987_050 Hb_010931_110--Hb_053543_010 Hb_098315_110 Hb_098315_110 Hb_000300_530--Hb_098315_110 Hb_000300_530--Hb_003125_050 Hb_023610_010 Hb_023610_010 Hb_000300_530--Hb_023610_010 Hb_012654_020 Hb_012654_020 Hb_000300_530--Hb_012654_020 Hb_011021_030 Hb_011021_030 Hb_000300_530--Hb_011021_030 Hb_154381_050 Hb_154381_050 Hb_000300_530--Hb_154381_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.95013 4.19932 0.0283607 0.315089 36.5105 11.247
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.72864 6.44936 15.5696 1.87475 0.281571

CAGE analysis