Hb_164732_010

Information

Type -
Description -
Location Contig164732: 2121-3624
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164732_010 0.0 - - -
2 Hb_019153_040 0.142443131 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
3 Hb_000300_330 0.1529180436 - - -
4 Hb_000567_160 0.1639041559 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Jatropha curcas]
5 Hb_002983_020 0.1810385917 - - PREDICTED: probable disease resistance protein At5g63020 [Populus euphratica]
6 Hb_009680_030 0.1951708962 - - PREDICTED: heat shock protein 83-like [Jatropha curcas]
7 Hb_006846_090 0.1968831499 - - PREDICTED: uncharacterized protein LOC105648695 [Jatropha curcas]
8 Hb_000300_340 0.2281434954 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
9 Hb_002818_100 0.2345412936 - - hypothetical protein JCGZ_14122 [Jatropha curcas]
10 Hb_004650_020 0.2387834739 - - -
11 Hb_001252_150 0.2402644282 - - -
12 Hb_010603_020 0.2434157065 - - -
13 Hb_004032_240 0.2454113536 - - electron transporter, putative [Ricinus communis]
14 Hb_010931_110 0.249998251 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_053543_010 0.251611808 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002311_250 0.2538596425 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
17 Hb_000331_150 0.2584873318 - - WD-repeat protein, putative [Ricinus communis]
18 Hb_000038_030 0.2616299572 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-like [Glycine max]
19 Hb_043629_020 0.261816121 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
20 Hb_000987_050 0.2632336695 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_164732_010 Hb_164732_010 Hb_019153_040 Hb_019153_040 Hb_164732_010--Hb_019153_040 Hb_000300_330 Hb_000300_330 Hb_164732_010--Hb_000300_330 Hb_000567_160 Hb_000567_160 Hb_164732_010--Hb_000567_160 Hb_002983_020 Hb_002983_020 Hb_164732_010--Hb_002983_020 Hb_009680_030 Hb_009680_030 Hb_164732_010--Hb_009680_030 Hb_006846_090 Hb_006846_090 Hb_164732_010--Hb_006846_090 Hb_019153_040--Hb_002983_020 Hb_004032_240 Hb_004032_240 Hb_019153_040--Hb_004032_240 Hb_019153_040--Hb_009680_030 Hb_010931_110 Hb_010931_110 Hb_019153_040--Hb_010931_110 Hb_008376_010 Hb_008376_010 Hb_019153_040--Hb_008376_010 Hb_000300_340 Hb_000300_340 Hb_000300_330--Hb_000300_340 Hb_000300_330--Hb_000567_160 Hb_000300_330--Hb_019153_040 Hb_000300_330--Hb_009680_030 Hb_000300_330--Hb_002983_020 Hb_000567_160--Hb_019153_040 Hb_000567_160--Hb_006846_090 Hb_000340_340 Hb_000340_340 Hb_000567_160--Hb_000340_340 Hb_043629_020 Hb_043629_020 Hb_000567_160--Hb_043629_020 Hb_002983_020--Hb_009680_030 Hb_000300_530 Hb_000300_530 Hb_002983_020--Hb_000300_530 Hb_003125_050 Hb_003125_050 Hb_002983_020--Hb_003125_050 Hb_002983_020--Hb_010931_110 Hb_053543_010 Hb_053543_010 Hb_002983_020--Hb_053543_010 Hb_009680_030--Hb_006846_090 Hb_002311_250 Hb_002311_250 Hb_009680_030--Hb_002311_250 Hb_009680_030--Hb_010931_110 Hb_009680_030--Hb_000300_530 Hb_006846_090--Hb_002983_020 Hb_006846_090--Hb_002311_250 Hb_000317_080 Hb_000317_080 Hb_006846_090--Hb_000317_080 Hb_029388_040 Hb_029388_040 Hb_006846_090--Hb_029388_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0965343 0 0 0 0.887851 0.172483
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112398 0.0883223 0.305522 0.0727738 0

CAGE analysis