Hb_011283_010

Information

Type -
Description -
Location Contig11283: 4997-6597
Sequence    

Annotation

kegg
ID vvi:100260649
description caffeic acid 3-O-methyltransferase-like
nr
ID XP_012068744.1
description PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
swissprot
ID Q43609
description Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1
trembl
ID A0A067L020
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24587 PE=4 SV=1
Gene Ontology
ID GO:0008171
description caffeic acid 3-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011283_010 0.0 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
2 Hb_045992_010 0.1091441491 - - -
3 Hb_000045_230 0.1098193015 - - PREDICTED: uncharacterized acetyltransferase At3g50280 [Jatropha curcas]
4 Hb_000120_440 0.1210956659 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000005_270 0.1253156204 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
6 Hb_009545_040 0.1292109032 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001165_040 0.1303697574 - - hypothetical protein POPTR_0009s10120g [Populus trichocarpa]
8 Hb_003057_080 0.1446314664 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 1-like [Jatropha curcas]
9 Hb_000021_090 0.149160508 - - -
10 Hb_004037_010 0.1493378991 - - PREDICTED: uncharacterized protein LOC105632369 [Jatropha curcas]
11 Hb_000301_030 0.1524577385 - - PREDICTED: pectate lyase-like [Jatropha curcas]
12 Hb_006153_190 0.1535082349 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
13 Hb_000513_110 0.1535196558 - - PREDICTED: germin-like protein subfamily 1 member 13 [Populus euphratica]
14 Hb_000462_100 0.1540729608 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
15 Hb_000120_710 0.154556373 - - unnamed protein product [Vitis vinifera]
16 Hb_001901_010 0.1546101261 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
17 Hb_001218_020 0.1546265309 transcription factor TF Family: MYB hypothetical protein POPTR_0005s17080g [Populus trichocarpa]
18 Hb_005356_010 0.1552461319 - - hypothetical protein POPTR_0003s16550g [Populus trichocarpa]
19 Hb_000019_220 0.1562531637 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]
20 Hb_010839_040 0.1577677014 - - hypothetical protein JCGZ_20868 [Jatropha curcas]

Gene co-expression network

sample Hb_011283_010 Hb_011283_010 Hb_045992_010 Hb_045992_010 Hb_011283_010--Hb_045992_010 Hb_000045_230 Hb_000045_230 Hb_011283_010--Hb_000045_230 Hb_000120_440 Hb_000120_440 Hb_011283_010--Hb_000120_440 Hb_000005_270 Hb_000005_270 Hb_011283_010--Hb_000005_270 Hb_009545_040 Hb_009545_040 Hb_011283_010--Hb_009545_040 Hb_001165_040 Hb_001165_040 Hb_011283_010--Hb_001165_040 Hb_001901_010 Hb_001901_010 Hb_045992_010--Hb_001901_010 Hb_045992_010--Hb_000005_270 Hb_001218_020 Hb_001218_020 Hb_045992_010--Hb_001218_020 Hb_006153_200 Hb_006153_200 Hb_045992_010--Hb_006153_200 Hb_045992_010--Hb_000120_440 Hb_002999_090 Hb_002999_090 Hb_045992_010--Hb_002999_090 Hb_003057_080 Hb_003057_080 Hb_000045_230--Hb_003057_080 Hb_000019_220 Hb_000019_220 Hb_000045_230--Hb_000019_220 Hb_004037_010 Hb_004037_010 Hb_000045_230--Hb_004037_010 Hb_001699_240 Hb_001699_240 Hb_000045_230--Hb_001699_240 Hb_000045_230--Hb_001165_040 Hb_000120_440--Hb_009545_040 Hb_000021_090 Hb_000021_090 Hb_000120_440--Hb_000021_090 Hb_000120_440--Hb_001165_040 Hb_000120_440--Hb_004037_010 Hb_000120_440--Hb_000005_270 Hb_000513_110 Hb_000513_110 Hb_000120_440--Hb_000513_110 Hb_000005_270--Hb_000513_110 Hb_000005_270--Hb_000021_090 Hb_000120_710 Hb_000120_710 Hb_000005_270--Hb_000120_710 Hb_000005_270--Hb_009545_040 Hb_009545_040--Hb_001165_040 Hb_009545_040--Hb_000021_090 Hb_009545_040--Hb_004037_010 Hb_025490_030 Hb_025490_030 Hb_009545_040--Hb_025490_030 Hb_006153_190 Hb_006153_190 Hb_009545_040--Hb_006153_190 Hb_002835_030 Hb_002835_030 Hb_001165_040--Hb_002835_030 Hb_000462_100 Hb_000462_100 Hb_001165_040--Hb_000462_100 Hb_010839_040 Hb_010839_040 Hb_001165_040--Hb_010839_040 Hb_001165_040--Hb_004037_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0986775 0 0.188829 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0409786 0 1.73128 0

CAGE analysis