Hb_010994_020

Information

Type -
Description -
Location Contig10994: 23842-25320
Sequence    

Annotation

kegg
ID cit:102624560
description protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
nr
ID XP_012086191.1
description PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
swissprot
ID Q40392
description TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
trembl
ID A0A067JQ32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010994_020 0.0 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
2 Hb_008651_010 0.1215295959 - - cytochrome P450, putative [Ricinus communis]
3 Hb_010223_010 0.1244680971 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
4 Hb_107174_010 0.1318741553 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_030903_020 0.1330982951 - - PREDICTED: putative 12-oxophytodienoate reductase 11 [Jatropha curcas]
6 Hb_000997_130 0.1331928828 - - DNA binding protein, putative [Ricinus communis]
7 Hb_179363_010 0.1347505015 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_032071_010 0.1389514405 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
9 Hb_112703_010 0.1394546722 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
10 Hb_002289_180 0.1408836957 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
11 Hb_004899_010 0.1577314824 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
12 Hb_164577_010 0.1624487035 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_000433_050 0.1625453379 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
14 Hb_012022_020 0.1627838842 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
15 Hb_009692_030 0.1633918642 - - WRKY DNA-binding protein 70, putative isoform 2, partial [Theobroma cacao]
16 Hb_004612_020 0.166331346 - - PREDICTED: tetraspanin-8-like [Populus euphratica]
17 Hb_000192_030 0.1705454874 - - PREDICTED: TATA-box-binding protein 2 isoform X1 [Setaria italica]
18 Hb_000164_160 0.1749238233 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
19 Hb_008637_020 0.1800074492 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000819_020 0.1811785117 - - hypothetical protein PRUPE_ppa020290mg, partial [Prunus persica]

Gene co-expression network

sample Hb_010994_020 Hb_010994_020 Hb_008651_010 Hb_008651_010 Hb_010994_020--Hb_008651_010 Hb_010223_010 Hb_010223_010 Hb_010994_020--Hb_010223_010 Hb_107174_010 Hb_107174_010 Hb_010994_020--Hb_107174_010 Hb_030903_020 Hb_030903_020 Hb_010994_020--Hb_030903_020 Hb_000997_130 Hb_000997_130 Hb_010994_020--Hb_000997_130 Hb_179363_010 Hb_179363_010 Hb_010994_020--Hb_179363_010 Hb_008651_010--Hb_179363_010 Hb_112703_010 Hb_112703_010 Hb_008651_010--Hb_112703_010 Hb_002289_180 Hb_002289_180 Hb_008651_010--Hb_002289_180 Hb_032071_010 Hb_032071_010 Hb_008651_010--Hb_032071_010 Hb_008651_010--Hb_010223_010 Hb_000433_050 Hb_000433_050 Hb_008651_010--Hb_000433_050 Hb_010223_010--Hb_107174_010 Hb_000192_030 Hb_000192_030 Hb_010223_010--Hb_000192_030 Hb_010223_010--Hb_000997_130 Hb_002999_150 Hb_002999_150 Hb_010223_010--Hb_002999_150 Hb_010223_010--Hb_032071_010 Hb_107174_010--Hb_002999_150 Hb_107174_010--Hb_000192_030 Hb_003207_220 Hb_003207_220 Hb_107174_010--Hb_003207_220 Hb_007894_040 Hb_007894_040 Hb_107174_010--Hb_007894_040 Hb_071654_010 Hb_071654_010 Hb_107174_010--Hb_071654_010 Hb_030903_020--Hb_032071_010 Hb_012022_020 Hb_012022_020 Hb_030903_020--Hb_012022_020 Hb_001846_030 Hb_001846_030 Hb_030903_020--Hb_001846_030 Hb_030903_020--Hb_008651_010 Hb_030903_020--Hb_000997_130 Hb_000997_130--Hb_002289_180 Hb_046610_010 Hb_046610_010 Hb_000997_130--Hb_046610_010 Hb_164577_010 Hb_164577_010 Hb_000997_130--Hb_164577_010 Hb_007546_010 Hb_007546_010 Hb_000997_130--Hb_007546_010 Hb_000164_160 Hb_000164_160 Hb_000997_130--Hb_000164_160 Hb_179363_010--Hb_112703_010 Hb_179363_010--Hb_000433_050 Hb_179363_010--Hb_032071_010 Hb_179363_010--Hb_002289_180 Hb_001515_040 Hb_001515_040 Hb_179363_010--Hb_001515_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0200449 0.748389 0.964089 0.178107 0.0301567 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis