Hb_009803_010

Information

Type -
Description -
Location Contig9803: 5255-9441
Sequence    

Annotation

kegg
ID cic:CICLE_v10021474mg
description hypothetical protein
nr
ID KDP37566.1
description hypothetical protein JCGZ_08257 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMV2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08257 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009803_010 0.0 - - hypothetical protein JCGZ_08257 [Jatropha curcas]
2 Hb_000025_220 0.1165164061 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
3 Hb_122741_010 0.1386599085 - - hypothetical protein JCGZ_02014 [Jatropha curcas]
4 Hb_005263_010 0.150772786 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Nicotiana sylvestris]
5 Hb_005368_030 0.1589605216 - - -
6 Hb_010367_020 0.18496503 - - hypothetical protein POPTR_0009s054801g, partial [Populus trichocarpa]
7 Hb_182507_010 0.1863347638 - - -
8 Hb_001660_140 0.188312963 - - -
9 Hb_013040_010 0.2020457531 - - hypothetical protein POPTR_0009s09690g [Populus trichocarpa]
10 Hb_001916_010 0.2027075906 - - hypothetical protein VITISV_021527 [Vitis vinifera]
11 Hb_000270_540 0.2139299092 - - hypothetical protein JCGZ_11527 [Jatropha curcas]
12 Hb_179286_010 0.2160107083 - - STRUWWELPETER family protein [Populus trichocarpa]
13 Hb_000092_050 0.2242539398 - - PREDICTED: uncharacterized protein LOC105628886 [Jatropha curcas]
14 Hb_009119_010 0.229317046 - - -
15 Hb_003641_010 0.2351446873 - - Pectinesterase-3 precursor, putative [Ricinus communis]
16 Hb_158296_010 0.2365913309 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
17 Hb_000244_140 0.2389369485 - - PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Jatropha curcas]
18 Hb_000025_080 0.2424990616 - - -
19 Hb_004907_030 0.2449243316 - - hypothetical protein POPTR_0012s032802g, partial [Populus trichocarpa]
20 Hb_000733_260 0.2460525468 - - hypothetical protein JCGZ_26934 [Jatropha curcas]

Gene co-expression network

sample Hb_009803_010 Hb_009803_010 Hb_000025_220 Hb_000025_220 Hb_009803_010--Hb_000025_220 Hb_122741_010 Hb_122741_010 Hb_009803_010--Hb_122741_010 Hb_005263_010 Hb_005263_010 Hb_009803_010--Hb_005263_010 Hb_005368_030 Hb_005368_030 Hb_009803_010--Hb_005368_030 Hb_010367_020 Hb_010367_020 Hb_009803_010--Hb_010367_020 Hb_182507_010 Hb_182507_010 Hb_009803_010--Hb_182507_010 Hb_000025_220--Hb_005263_010 Hb_000733_260 Hb_000733_260 Hb_000025_220--Hb_000733_260 Hb_000025_220--Hb_005368_030 Hb_003641_010 Hb_003641_010 Hb_000025_220--Hb_003641_010 Hb_000574_310 Hb_000574_310 Hb_000025_220--Hb_000574_310 Hb_001916_010 Hb_001916_010 Hb_122741_010--Hb_001916_010 Hb_004907_040 Hb_004907_040 Hb_122741_010--Hb_004907_040 Hb_000134_100 Hb_000134_100 Hb_122741_010--Hb_000134_100 Hb_122741_010--Hb_010367_020 Hb_158296_010 Hb_158296_010 Hb_122741_010--Hb_158296_010 Hb_005263_010--Hb_005368_030 Hb_005263_010--Hb_182507_010 Hb_001660_140 Hb_001660_140 Hb_005263_010--Hb_001660_140 Hb_013040_010 Hb_013040_010 Hb_005263_010--Hb_013040_010 Hb_005368_030--Hb_182507_010 Hb_005368_030--Hb_001660_140 Hb_005368_030--Hb_013040_010 Hb_000270_540 Hb_000270_540 Hb_005368_030--Hb_000270_540 Hb_004907_030 Hb_004907_030 Hb_005368_030--Hb_004907_030 Hb_002016_030 Hb_002016_030 Hb_010367_020--Hb_002016_030 Hb_009119_010 Hb_009119_010 Hb_010367_020--Hb_009119_010 Hb_000025_080 Hb_000025_080 Hb_010367_020--Hb_000025_080 Hb_010367_020--Hb_158296_010 Hb_182507_010--Hb_001660_140 Hb_182507_010--Hb_013040_010 Hb_182507_010--Hb_004907_030 Hb_182507_010--Hb_000270_540 Hb_033312_110 Hb_033312_110 Hb_182507_010--Hb_033312_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0363203 0.579398 0 0.203887
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis