Hb_122741_010

Information

Type -
Description -
Location Contig122741: 26-533
Sequence    

Annotation

kegg
ID rcu:RCOM_0680210
description hypothetical protein
nr
ID KDP40016.1
description hypothetical protein JCGZ_02014 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUW8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02014 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_122741_010 0.0 - - hypothetical protein JCGZ_02014 [Jatropha curcas]
2 Hb_001916_010 0.082464374 - - hypothetical protein VITISV_021527 [Vitis vinifera]
3 Hb_004907_040 0.1231081629 - - hypothetical protein POPTR_0011s079751g, partial [Populus trichocarpa]
4 Hb_009803_010 0.1386599085 - - hypothetical protein JCGZ_08257 [Jatropha curcas]
5 Hb_000134_100 0.1781830911 - - PREDICTED: putative disease resistance protein RGA1 [Prunus mume]
6 Hb_010367_020 0.1996685765 - - hypothetical protein POPTR_0009s054801g, partial [Populus trichocarpa]
7 Hb_158296_010 0.2323537532 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
8 Hb_060585_010 0.2363281434 - - unnamed protein product [Coffea canephora]
9 Hb_000025_220 0.2410955669 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
10 Hb_002108_020 0.2442290139 - - hypothetical protein JCGZ_16012 [Jatropha curcas]
11 Hb_179286_010 0.2495896927 - - STRUWWELPETER family protein [Populus trichocarpa]
12 Hb_007416_080 0.2570982212 - - -
13 Hb_005368_030 0.2584396528 - - -
14 Hb_012675_020 0.2613604761 - - hypothetical protein CISIN_1g018227mg [Citrus sinensis]
15 Hb_000562_010 0.2632630742 desease resistance Gene Name: NB-ARC putative disease resistance gene NBS-LRR family protein [Populus trichocarpa]
16 Hb_182507_010 0.2642085027 - - -
17 Hb_001660_140 0.2649012527 - - -
18 Hb_005263_010 0.2670715879 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Nicotiana sylvestris]
19 Hb_013040_010 0.2703231936 - - hypothetical protein POPTR_0009s09690g [Populus trichocarpa]
20 Hb_000244_140 0.2747255743 - - PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_122741_010 Hb_122741_010 Hb_001916_010 Hb_001916_010 Hb_122741_010--Hb_001916_010 Hb_004907_040 Hb_004907_040 Hb_122741_010--Hb_004907_040 Hb_009803_010 Hb_009803_010 Hb_122741_010--Hb_009803_010 Hb_000134_100 Hb_000134_100 Hb_122741_010--Hb_000134_100 Hb_010367_020 Hb_010367_020 Hb_122741_010--Hb_010367_020 Hb_158296_010 Hb_158296_010 Hb_122741_010--Hb_158296_010 Hb_001916_010--Hb_004907_040 Hb_001916_010--Hb_000134_100 Hb_002108_020 Hb_002108_020 Hb_001916_010--Hb_002108_020 Hb_012675_020 Hb_012675_020 Hb_001916_010--Hb_012675_020 Hb_001916_010--Hb_009803_010 Hb_004907_040--Hb_000134_100 Hb_004907_040--Hb_002108_020 Hb_012539_090 Hb_012539_090 Hb_004907_040--Hb_012539_090 Hb_004907_040--Hb_012675_020 Hb_000025_220 Hb_000025_220 Hb_009803_010--Hb_000025_220 Hb_005263_010 Hb_005263_010 Hb_009803_010--Hb_005263_010 Hb_005368_030 Hb_005368_030 Hb_009803_010--Hb_005368_030 Hb_009803_010--Hb_010367_020 Hb_182507_010 Hb_182507_010 Hb_009803_010--Hb_182507_010 Hb_000134_100--Hb_002108_020 Hb_000134_100--Hb_012675_020 Hb_002636_140 Hb_002636_140 Hb_000134_100--Hb_002636_140 Hb_002016_030 Hb_002016_030 Hb_010367_020--Hb_002016_030 Hb_009119_010 Hb_009119_010 Hb_010367_020--Hb_009119_010 Hb_000025_080 Hb_000025_080 Hb_010367_020--Hb_000025_080 Hb_010367_020--Hb_158296_010 Hb_000562_010 Hb_000562_010 Hb_158296_010--Hb_000562_010 Hb_133648_010 Hb_133648_010 Hb_158296_010--Hb_133648_010 Hb_007416_080 Hb_007416_080 Hb_158296_010--Hb_007416_080 Hb_001208_020 Hb_001208_020 Hb_158296_010--Hb_001208_020 Hb_000164_130 Hb_000164_130 Hb_158296_010--Hb_000164_130 Hb_000244_140 Hb_000244_140 Hb_158296_010--Hb_000244_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0458763 0.214127 0 0.100304
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis