Hb_009265_020

Information

Type -
Description -
Location Contig9265: 49028-50404
Sequence    

Annotation

kegg
ID rcu:RCOM_1012210
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002522508.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q53UH4
description Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase OS=Ipomoea nil GN=3GGT PE=1 SV=1
trembl
ID B9S939
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_1012210 PE=3 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucoside 2 -o-glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009265_020 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_000115_270 0.1685294006 transcription factor TF Family: MYB hypothetical protein POPTR_0010s13290g [Populus trichocarpa]
3 Hb_098842_010 0.2562004012 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
4 Hb_002490_040 0.2566744799 - - 20S proteasome beta subunit C2 [Hevea brasiliensis]
5 Hb_176022_010 0.2578275889 - - -
6 Hb_056531_040 0.2602918525 - - PREDICTED: uncharacterized protein LOC103494239 [Cucumis melo]
7 Hb_000059_090 0.2634865265 - - -
8 Hb_001241_060 0.2643054141 - - -
9 Hb_001676_040 0.2643431523 - - PREDICTED: uncharacterized protein LOC105637261 isoform X2 [Jatropha curcas]
10 Hb_010024_010 0.2661693238 - - Ran GTPase binding protein, putative [Ricinus communis]
11 Hb_022593_060 0.268225226 - - -
12 Hb_004429_040 0.2728032836 - - -
13 Hb_002490_050 0.2739034879 - - Os02g0182500, partial [Oryza sativa Japonica Group]
14 Hb_004282_030 0.2750715253 - - hypothetical protein EUGRSUZ_B01857 [Eucalyptus grandis]
15 Hb_017134_020 0.2751137468 - - -
16 Hb_001206_070 0.2778494921 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_000962_010 0.2779143611 - - -
18 Hb_105484_010 0.2779193507 - - carbohydrate-binding-like fold protein, partial [Manihot esculenta]
19 Hb_010997_050 0.2795170524 transcription factor TF Family: mTERF unnamed protein product [Coffea canephora]
20 Hb_001385_050 0.2844376784 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_009265_020 Hb_009265_020 Hb_000115_270 Hb_000115_270 Hb_009265_020--Hb_000115_270 Hb_098842_010 Hb_098842_010 Hb_009265_020--Hb_098842_010 Hb_002490_040 Hb_002490_040 Hb_009265_020--Hb_002490_040 Hb_176022_010 Hb_176022_010 Hb_009265_020--Hb_176022_010 Hb_056531_040 Hb_056531_040 Hb_009265_020--Hb_056531_040 Hb_000059_090 Hb_000059_090 Hb_009265_020--Hb_000059_090 Hb_001691_160 Hb_001691_160 Hb_000115_270--Hb_001691_160 Hb_004282_030 Hb_004282_030 Hb_000115_270--Hb_004282_030 Hb_000115_270--Hb_056531_040 Hb_000115_270--Hb_000059_090 Hb_000115_270--Hb_098842_010 Hb_010997_050 Hb_010997_050 Hb_098842_010--Hb_010997_050 Hb_105484_010 Hb_105484_010 Hb_098842_010--Hb_105484_010 Hb_000004_140 Hb_000004_140 Hb_098842_010--Hb_000004_140 Hb_098842_010--Hb_004282_030 Hb_076583_010 Hb_076583_010 Hb_098842_010--Hb_076583_010 Hb_064951_010 Hb_064951_010 Hb_098842_010--Hb_064951_010 Hb_004429_040 Hb_004429_040 Hb_002490_040--Hb_004429_040 Hb_000563_290 Hb_000563_290 Hb_002490_040--Hb_000563_290 Hb_001241_060 Hb_001241_060 Hb_002490_040--Hb_001241_060 Hb_000195_050 Hb_000195_050 Hb_002490_040--Hb_000195_050 Hb_038675_010 Hb_038675_010 Hb_002490_040--Hb_038675_010 Hb_059069_010 Hb_059069_010 Hb_002490_040--Hb_059069_010 Hb_002490_050 Hb_002490_050 Hb_176022_010--Hb_002490_050 Hb_011360_100 Hb_011360_100 Hb_176022_010--Hb_011360_100 Hb_176022_010--Hb_059069_010 Hb_176022_010--Hb_038675_010 Hb_004458_050 Hb_004458_050 Hb_176022_010--Hb_004458_050 Hb_005741_010 Hb_005741_010 Hb_176022_010--Hb_005741_010 Hb_056531_040--Hb_000059_090 Hb_086287_020 Hb_086287_020 Hb_056531_040--Hb_086287_020 Hb_000002_030 Hb_000002_030 Hb_056531_040--Hb_000002_030 Hb_124567_010 Hb_124567_010 Hb_056531_040--Hb_124567_010 Hb_053582_010 Hb_053582_010 Hb_056531_040--Hb_053582_010 Hb_000295_090 Hb_000295_090 Hb_000059_090--Hb_000295_090 Hb_000707_070 Hb_000707_070 Hb_000059_090--Hb_000707_070 Hb_001235_060 Hb_001235_060 Hb_000059_090--Hb_001235_060 Hb_115578_010 Hb_115578_010 Hb_000059_090--Hb_115578_010 Hb_000059_090--Hb_086287_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.67941 0.0376041 0 0.0112414 0.458951 12.699
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.47299 0.195158 0

CAGE analysis