Hb_004282_030

Information

Type -
Description -
Location Contig4282: 95731-96204
Sequence    

Annotation

kegg
ID crb:CARUB_v10008012mg
description hypothetical protein
nr
ID KCW85022.1
description hypothetical protein EUGRSUZ_B01857 [Eucalyptus grandis]
swissprot
ID P23799
description Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei brucei GN=ESAG8 PE=2 SV=1
trembl
ID A0A059D375
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01857 PE=4 SV=1
Gene Ontology
ID GO:0050896
description disease resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004282_030 0.0 - - hypothetical protein EUGRSUZ_B01857 [Eucalyptus grandis]
2 Hb_010997_050 0.1598150638 transcription factor TF Family: mTERF unnamed protein product [Coffea canephora]
3 Hb_098842_010 0.1626596476 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
4 Hb_000004_140 0.1737266453 - - -
5 Hb_004829_020 0.1800079217 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_012340_040 0.1800148271 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Populus euphratica]
7 Hb_124567_010 0.1813086865 - - -
8 Hb_000795_010 0.1825833555 - - -
9 Hb_000115_270 0.2015028292 transcription factor TF Family: MYB hypothetical protein POPTR_0010s13290g [Populus trichocarpa]
10 Hb_076583_010 0.2068974714 - - hypothetical protein JCGZ_17827 [Jatropha curcas]
11 Hb_111834_010 0.2182425385 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
12 Hb_064951_010 0.2195700427 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
13 Hb_105484_010 0.2264114709 - - carbohydrate-binding-like fold protein, partial [Manihot esculenta]
14 Hb_007761_010 0.228332659 - - -
15 Hb_128173_010 0.2283980363 - - PREDICTED: uncharacterized protein LOC104219073 [Nicotiana sylvestris]
16 Hb_111332_010 0.2306048734 - - Dihydroneopterin aldolase [Morus notabilis]
17 Hb_105480_010 0.2328693325 - - -
18 Hb_003636_050 0.2353689542 - - PREDICTED: bark storage protein A-like [Populus euphratica]
19 Hb_005542_020 0.2384716234 - - lupus la ribonucleoprotein, putative [Ricinus communis]
20 Hb_006692_050 0.2406899335 - - Chloroplastic lipocalin [Theobroma cacao]

Gene co-expression network

sample Hb_004282_030 Hb_004282_030 Hb_010997_050 Hb_010997_050 Hb_004282_030--Hb_010997_050 Hb_098842_010 Hb_098842_010 Hb_004282_030--Hb_098842_010 Hb_000004_140 Hb_000004_140 Hb_004282_030--Hb_000004_140 Hb_004829_020 Hb_004829_020 Hb_004282_030--Hb_004829_020 Hb_012340_040 Hb_012340_040 Hb_004282_030--Hb_012340_040 Hb_124567_010 Hb_124567_010 Hb_004282_030--Hb_124567_010 Hb_010997_050--Hb_098842_010 Hb_105484_010 Hb_105484_010 Hb_010997_050--Hb_105484_010 Hb_010997_050--Hb_000004_140 Hb_076583_010 Hb_076583_010 Hb_010997_050--Hb_076583_010 Hb_064951_010 Hb_064951_010 Hb_010997_050--Hb_064951_010 Hb_098842_010--Hb_105484_010 Hb_098842_010--Hb_000004_140 Hb_098842_010--Hb_076583_010 Hb_098842_010--Hb_064951_010 Hb_000004_140--Hb_076583_010 Hb_128173_010 Hb_128173_010 Hb_000004_140--Hb_128173_010 Hb_007761_010 Hb_007761_010 Hb_000004_140--Hb_007761_010 Hb_004829_020--Hb_012340_040 Hb_000795_010 Hb_000795_010 Hb_004829_020--Hb_000795_010 Hb_000174_280 Hb_000174_280 Hb_004829_020--Hb_000174_280 Hb_004829_020--Hb_007761_010 Hb_004829_020--Hb_128173_010 Hb_012340_040--Hb_000795_010 Hb_012340_040--Hb_000174_280 Hb_012340_040--Hb_007761_010 Hb_012340_040--Hb_128173_010 Hb_003636_050 Hb_003636_050 Hb_124567_010--Hb_003636_050 Hb_124567_010--Hb_010997_050 Hb_001691_160 Hb_001691_160 Hb_124567_010--Hb_001691_160 Hb_056531_040 Hb_056531_040 Hb_124567_010--Hb_056531_040 Hb_086287_020 Hb_086287_020 Hb_124567_010--Hb_086287_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0624969 0 0 0 0.117641 0.873953
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0481757 0

CAGE analysis