Hb_008931_010

Information

Type -
Description -
Location Contig8931: 3025-21339
Sequence    

Annotation

kegg
ID gmx:100779522
description macrophage erythroblast attacher-like
nr
ID XP_012073466.1
description PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
swissprot
ID Q5R532
description Macrophage erythroblast attacher OS=Pongo abelii GN=MAEA PE=2 SV=1
trembl
ID A0A067LFT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06639 PE=4 SV=1
Gene Ontology
ID GO:0044424
description macrophage erythroblast attacher

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61708: 6378-11200
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008931_010 0.0 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
2 Hb_005539_240 0.1177495993 - - hypothetical protein MIMGU_mgv1a0220462mg, partial [Erythranthe guttata]
3 Hb_005505_020 0.1572256834 - - Potassium channel AKT1, putative [Ricinus communis]
4 Hb_002759_240 0.1659739061 - - hypothetical protein EUGRSUZ_E01319 [Eucalyptus grandis]
5 Hb_001846_070 0.1684451454 - - PREDICTED: fructokinase-1 [Jatropha curcas]
6 Hb_061802_010 0.1725857362 - - hypothetical protein VITISV_011986 [Vitis vinifera]
7 Hb_002182_090 0.1781047451 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF4.6-like isoform X1 [Gossypium raimondii]
8 Hb_000069_660 0.1783943455 - - PREDICTED: mitochondrial carrier protein MTM1 isoform X1 [Jatropha curcas]
9 Hb_000165_010 0.1786224706 - - hypothetical protein POPTR_0010s19120g [Populus trichocarpa]
10 Hb_000723_190 0.1802564036 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
11 Hb_009485_010 0.1866638873 - - PREDICTED: uncharacterized protein LOC105641071 [Jatropha curcas]
12 Hb_000836_130 0.1866750252 - - PREDICTED: uncharacterized protein LOC105642953 isoform X2 [Jatropha curcas]
13 Hb_000368_060 0.1882231045 - - thioredoxin H-type 6 [Hevea brasiliensis]
14 Hb_005841_040 0.1894544303 - - stress-induced hydrophobic peptide 1 [Hevea brasiliensis]
15 Hb_001232_130 0.1899652908 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1-like [Jatropha curcas]
16 Hb_003581_220 0.1905022274 - - unnamed protein product [Vitis vinifera]
17 Hb_006594_020 0.1925593541 - - PREDICTED: uncharacterized protein LOC105138974 isoform X1 [Populus euphratica]
18 Hb_002603_150 0.1931780421 - - PREDICTED: protein yippee-like [Jatropha curcas]
19 Hb_003642_050 0.1935358499 - - hypothetical protein CISIN_1g048193mg, partial [Citrus sinensis]
20 Hb_002820_010 0.1955216654 - - PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_008931_010 Hb_008931_010 Hb_005539_240 Hb_005539_240 Hb_008931_010--Hb_005539_240 Hb_005505_020 Hb_005505_020 Hb_008931_010--Hb_005505_020 Hb_002759_240 Hb_002759_240 Hb_008931_010--Hb_002759_240 Hb_001846_070 Hb_001846_070 Hb_008931_010--Hb_001846_070 Hb_061802_010 Hb_061802_010 Hb_008931_010--Hb_061802_010 Hb_002182_090 Hb_002182_090 Hb_008931_010--Hb_002182_090 Hb_000368_060 Hb_000368_060 Hb_005539_240--Hb_000368_060 Hb_001232_130 Hb_001232_130 Hb_005539_240--Hb_001232_130 Hb_000061_300 Hb_000061_300 Hb_005539_240--Hb_000061_300 Hb_001575_020 Hb_001575_020 Hb_005539_240--Hb_001575_020 Hb_001616_060 Hb_001616_060 Hb_005539_240--Hb_001616_060 Hb_002918_140 Hb_002918_140 Hb_005505_020--Hb_002918_140 Hb_006738_010 Hb_006738_010 Hb_005505_020--Hb_006738_010 Hb_000563_240 Hb_000563_240 Hb_005505_020--Hb_000563_240 Hb_003579_030 Hb_003579_030 Hb_005505_020--Hb_003579_030 Hb_007645_080 Hb_007645_080 Hb_005505_020--Hb_007645_080 Hb_034585_050 Hb_034585_050 Hb_005505_020--Hb_034585_050 Hb_001894_170 Hb_001894_170 Hb_002759_240--Hb_001894_170 Hb_002759_240--Hb_001846_070 Hb_000264_020 Hb_000264_020 Hb_002759_240--Hb_000264_020 Hb_146225_010 Hb_146225_010 Hb_002759_240--Hb_146225_010 Hb_005841_040 Hb_005841_040 Hb_002759_240--Hb_005841_040 Hb_001052_030 Hb_001052_030 Hb_002759_240--Hb_001052_030 Hb_003581_220 Hb_003581_220 Hb_001846_070--Hb_003581_220 Hb_000530_070 Hb_000530_070 Hb_001846_070--Hb_000530_070 Hb_001846_070--Hb_000264_020 Hb_001846_070--Hb_146225_010 Hb_002182_030 Hb_002182_030 Hb_001846_070--Hb_002182_030 Hb_000210_220 Hb_000210_220 Hb_061802_010--Hb_000210_220 Hb_000329_180 Hb_000329_180 Hb_061802_010--Hb_000329_180 Hb_061802_010--Hb_001575_020 Hb_071947_010 Hb_071947_010 Hb_061802_010--Hb_071947_010 Hb_061802_010--Hb_005505_020 Hb_061802_010--Hb_000061_300 Hb_001279_130 Hb_001279_130 Hb_002182_090--Hb_001279_130 Hb_001268_080 Hb_001268_080 Hb_002182_090--Hb_001268_080 Hb_072912_020 Hb_072912_020 Hb_002182_090--Hb_072912_020 Hb_000723_190 Hb_000723_190 Hb_002182_090--Hb_000723_190 Hb_002603_150 Hb_002603_150 Hb_002182_090--Hb_002603_150 Hb_000215_180 Hb_000215_180 Hb_002182_090--Hb_000215_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.220714 0.0205706 0.0153623 0.0159877 0.100287 0.0361499
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.281935 0.517425 0.478036 0.0445255 0.151855

CAGE analysis