Hb_006738_010

Information

Type -
Description -
Location Contig6738: 20253-20795
Sequence    

Annotation

kegg
ID rcu:RCOM_1494320
description hypothetical protein
nr
ID XP_012073361.1
description PREDICTED: uncharacterized protein LOC105634993 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06291 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006738_010 0.0 - - PREDICTED: uncharacterized protein LOC105634993 [Jatropha curcas]
2 Hb_034585_050 0.1000885301 - - -
3 Hb_005505_020 0.1277684874 - - Potassium channel AKT1, putative [Ricinus communis]
4 Hb_001785_040 0.1295882036 - - cytochrome b5 isoform Cb5-A [Vernicia fordii]
5 Hb_002918_140 0.1349292784 - - PREDICTED: protein yippee-like At5g53940 [Jatropha curcas]
6 Hb_001159_200 0.1384211304 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic-like [Jatropha curcas]
7 Hb_183086_040 0.1451895297 - - cytochrome b5 isoform Cb5-A [Vernicia fordii]
8 Hb_000224_090 0.1461778967 - - Eukaryotic translation initiation factor 1A [Gossypium arboreum]
9 Hb_003043_120 0.1466682558 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001369_400 0.148286692 - - PREDICTED: uncharacterized protein LOC105648609 [Jatropha curcas]
11 Hb_001017_070 0.1483560579 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000365_080 0.1504857124 - - PREDICTED: uncharacterized protein LOC105649037 [Jatropha curcas]
13 Hb_007575_070 0.15199895 - - Histone H3.2 [Glycine soja]
14 Hb_002603_150 0.1527265155 - - PREDICTED: protein yippee-like [Jatropha curcas]
15 Hb_017862_010 0.1539828464 - - PREDICTED: signal recognition particle 19 kDa protein-like [Jatropha curcas]
16 Hb_004129_150 0.1540273101 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a-like [Jatropha curcas]
17 Hb_000260_200 0.1544733364 - - -
18 Hb_003929_120 0.1544831164 - - PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Jatropha curcas]
19 Hb_003349_070 0.1545592233 - - PREDICTED: signal recognition particle 14 kDa protein [Gossypium raimondii]
20 Hb_003086_060 0.1546455099 - - PREDICTED: uncharacterized protein LOC105629937 [Jatropha curcas]

Gene co-expression network

sample Hb_006738_010 Hb_006738_010 Hb_034585_050 Hb_034585_050 Hb_006738_010--Hb_034585_050 Hb_005505_020 Hb_005505_020 Hb_006738_010--Hb_005505_020 Hb_001785_040 Hb_001785_040 Hb_006738_010--Hb_001785_040 Hb_002918_140 Hb_002918_140 Hb_006738_010--Hb_002918_140 Hb_001159_200 Hb_001159_200 Hb_006738_010--Hb_001159_200 Hb_183086_040 Hb_183086_040 Hb_006738_010--Hb_183086_040 Hb_034585_050--Hb_002918_140 Hb_010594_030 Hb_010594_030 Hb_034585_050--Hb_010594_030 Hb_003043_120 Hb_003043_120 Hb_034585_050--Hb_003043_120 Hb_011245_020 Hb_011245_020 Hb_034585_050--Hb_011245_020 Hb_017862_010 Hb_017862_010 Hb_034585_050--Hb_017862_010 Hb_005505_020--Hb_002918_140 Hb_000563_240 Hb_000563_240 Hb_005505_020--Hb_000563_240 Hb_003579_030 Hb_003579_030 Hb_005505_020--Hb_003579_030 Hb_007645_080 Hb_007645_080 Hb_005505_020--Hb_007645_080 Hb_005505_020--Hb_034585_050 Hb_001604_030 Hb_001604_030 Hb_001785_040--Hb_001604_030 Hb_000260_200 Hb_000260_200 Hb_001785_040--Hb_000260_200 Hb_002603_150 Hb_002603_150 Hb_001785_040--Hb_002603_150 Hb_032969_030 Hb_032969_030 Hb_001785_040--Hb_032969_030 Hb_000012_100 Hb_000012_100 Hb_001785_040--Hb_000012_100 Hb_089100_020 Hb_089100_020 Hb_001785_040--Hb_089100_020 Hb_001863_420 Hb_001863_420 Hb_002918_140--Hb_001863_420 Hb_001386_050 Hb_001386_050 Hb_002918_140--Hb_001386_050 Hb_001017_070 Hb_001017_070 Hb_002918_140--Hb_001017_070 Hb_002918_140--Hb_017862_010 Hb_000676_240 Hb_000676_240 Hb_002918_140--Hb_000676_240 Hb_001369_400 Hb_001369_400 Hb_001159_200--Hb_001369_400 Hb_000281_230 Hb_000281_230 Hb_001159_200--Hb_000281_230 Hb_002876_370 Hb_002876_370 Hb_001159_200--Hb_002876_370 Hb_000788_080 Hb_000788_080 Hb_001159_200--Hb_000788_080 Hb_000318_490 Hb_000318_490 Hb_001159_200--Hb_000318_490 Hb_001159_200--Hb_001863_420 Hb_000922_100 Hb_000922_100 Hb_183086_040--Hb_000922_100 Hb_000780_210 Hb_000780_210 Hb_183086_040--Hb_000780_210 Hb_000896_120 Hb_000896_120 Hb_183086_040--Hb_000896_120 Hb_000215_180 Hb_000215_180 Hb_183086_040--Hb_000215_180 Hb_000085_330 Hb_000085_330 Hb_183086_040--Hb_000085_330 Hb_000224_090 Hb_000224_090 Hb_183086_040--Hb_000224_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.9713 6.84566 1.86494 3.39213 3.01718 14.4693
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
57.2643 80.2893 38.7972 8.46802 10.1904

CAGE analysis