Hb_008195_080

Information

Type -
Description -
Location Contig8195: 94370-99619
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008195_080 0.0 - - -
2 Hb_063885_010 0.1321211432 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
3 Hb_001081_070 0.1496521008 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
4 Hb_001674_050 0.1508604111 - - cytochrome b6 (chloroplast) [Apios americana]
5 Hb_006331_010 0.1512104292 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
6 Hb_004138_020 0.1537350592 - - PREDICTED: cucumisin-like [Populus euphratica]
7 Hb_083242_040 0.1540314851 - - -
8 Hb_001715_050 0.1556286535 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Jatropha curcas]
9 Hb_003228_060 0.1591442265 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006272_010 0.1600039038 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
11 Hb_009095_020 0.1608051718 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
12 Hb_048694_010 0.1618982242 - - catalytic, putative [Ricinus communis]
13 Hb_034168_060 0.1625709645 - - ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Cucumis argenteus]
14 Hb_145745_010 0.1631128801 - - BnaUnng00830D [Brassica napus]
15 Hb_000696_200 0.1649376976 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
16 Hb_003477_020 0.1660818223 desease resistance Gene Name: AAA_29 PREDICTED: ABC transporter G family member 15-like [Populus euphratica]
17 Hb_007645_040 0.1669107876 - - ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Tachigali myrmecophila]
18 Hb_005171_020 0.1681412953 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
19 Hb_151890_020 0.1684844425 - - photosystem II cp47 protein, partial (chloroplast) [Pentaphragma sp. Duangjai 49]
20 Hb_102602_010 0.1688075502 - - orf175 (mitochondrion) [Panax ginseng]

Gene co-expression network

sample Hb_008195_080 Hb_008195_080 Hb_063885_010 Hb_063885_010 Hb_008195_080--Hb_063885_010 Hb_001081_070 Hb_001081_070 Hb_008195_080--Hb_001081_070 Hb_001674_050 Hb_001674_050 Hb_008195_080--Hb_001674_050 Hb_006331_010 Hb_006331_010 Hb_008195_080--Hb_006331_010 Hb_004138_020 Hb_004138_020 Hb_008195_080--Hb_004138_020 Hb_083242_040 Hb_083242_040 Hb_008195_080--Hb_083242_040 Hb_003947_020 Hb_003947_020 Hb_063885_010--Hb_003947_020 Hb_026188_010 Hb_026188_010 Hb_063885_010--Hb_026188_010 Hb_034168_060 Hb_034168_060 Hb_063885_010--Hb_034168_060 Hb_009095_020 Hb_009095_020 Hb_063885_010--Hb_009095_020 Hb_000336_130 Hb_000336_130 Hb_063885_010--Hb_000336_130 Hb_000696_200 Hb_000696_200 Hb_063885_010--Hb_000696_200 Hb_001081_070--Hb_004138_020 Hb_001081_070--Hb_006331_010 Hb_002294_020 Hb_002294_020 Hb_001081_070--Hb_002294_020 Hb_001081_070--Hb_083242_040 Hb_003477_020 Hb_003477_020 Hb_001081_070--Hb_003477_020 Hb_001081_070--Hb_009095_020 Hb_141708_010 Hb_141708_010 Hb_001674_050--Hb_141708_010 Hb_001338_080 Hb_001338_080 Hb_001674_050--Hb_001338_080 Hb_001674_050--Hb_063885_010 Hb_182972_020 Hb_182972_020 Hb_001674_050--Hb_182972_020 Hb_001083_040 Hb_001083_040 Hb_001674_050--Hb_001083_040 Hb_151890_020 Hb_151890_020 Hb_001674_050--Hb_151890_020 Hb_048694_010 Hb_048694_010 Hb_006331_010--Hb_048694_010 Hb_006331_010--Hb_083242_040 Hb_006331_010--Hb_004138_020 Hb_001715_050 Hb_001715_050 Hb_006331_010--Hb_001715_050 Hb_006331_010--Hb_009095_020 Hb_004138_020--Hb_003477_020 Hb_007645_040 Hb_007645_040 Hb_004138_020--Hb_007645_040 Hb_004138_020--Hb_034168_060 Hb_004138_020--Hb_083242_040 Hb_083242_040--Hb_001715_050 Hb_003228_060 Hb_003228_060 Hb_083242_040--Hb_003228_060 Hb_083242_040--Hb_000696_200 Hb_006272_010 Hb_006272_010 Hb_083242_040--Hb_006272_010 Hb_005171_020 Hb_005171_020 Hb_083242_040--Hb_005171_020 Hb_083242_040--Hb_034168_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0547714 0.184343 0 0.0141826
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0948516 0 2.21778

CAGE analysis