Hb_007766_010

Information

Type -
Description -
Location Contig7766: 9704-15523
Sequence    

Annotation

kegg
ID pop:POPTR_0004s24310g
description alcohol oxidase-related family protein
nr
ID KDP37816.1
description hypothetical protein JCGZ_06718 [Jatropha curcas]
swissprot
ID O65709
description Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2
trembl
ID A0A067KNM1
description Long-chain-alcohol oxidase OS=Jatropha curcas GN=JCGZ_06718 PE=3 SV=1
Gene Ontology
ID GO:0016020
description long-chain-alcohol oxidase fao4a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57843: 9650-15422 , PASA_asmbl_57844: 15002-15190
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007766_010 0.0 - - hypothetical protein JCGZ_06718 [Jatropha curcas]
2 Hb_004724_040 0.0904557394 - - PREDICTED: uncharacterized protein LOC105640153 isoform X1 [Jatropha curcas]
3 Hb_006070_010 0.0929586474 rubber biosynthesis Gene Name: CPT2 cis-prenyltransferase 3 [Hevea brasiliensis]
4 Hb_000481_020 0.0940061198 - - PREDICTED: shikimate kinase 1, chloroplastic [Jatropha curcas]
5 Hb_010483_020 0.1037792481 - - latex allergen [Hevea brasiliensis]
6 Hb_000258_430 0.1073819025 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
7 Hb_001696_030 0.1083711978 - - cytochrome P450, putative [Ricinus communis]
8 Hb_004659_120 0.1230686537 rubber biosynthesis Gene Name: CPTL PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X3 [Jatropha curcas]
9 Hb_001205_090 0.1265056759 - - PREDICTED: random slug protein 5 [Jatropha curcas]
10 Hb_010174_120 0.1289134188 - - PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Gossypium raimondii]
11 Hb_000184_040 0.1337381217 rubber biosynthesis Gene Name: Acetyl-CoA acetyltransferase PREDICTED: acetyl-CoA acetyltransferase, cytosolic 1-like isoform X2 [Nelumbo nucifera]
12 Hb_008408_030 0.135817089 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
13 Hb_007919_050 0.13582465 - - PREDICTED: uncharacterized protein LOC105635142 isoform X2 [Jatropha curcas]
14 Hb_055335_010 0.1368423651 - - PREDICTED: tetraspanin-2 [Jatropha curcas]
15 Hb_003777_180 0.1383211978 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 isoform X1 [Jatropha curcas]
16 Hb_001315_020 0.1413759025 - - ring finger protein, putative [Ricinus communis]
17 Hb_005167_040 0.1420351547 - - PREDICTED: phospholipase A1-IIdelta [Jatropha curcas]
18 Hb_005918_040 0.1421193857 - - hypothetical protein POPTR_0003s04560g [Populus trichocarpa]
19 Hb_006120_200 0.1422656929 - - PREDICTED: uncharacterized protein LOC103333282 [Prunus mume]
20 Hb_001017_090 0.1423701157 - - -

Gene co-expression network

sample Hb_007766_010 Hb_007766_010 Hb_004724_040 Hb_004724_040 Hb_007766_010--Hb_004724_040 Hb_006070_010 Hb_006070_010 Hb_007766_010--Hb_006070_010 Hb_000481_020 Hb_000481_020 Hb_007766_010--Hb_000481_020 Hb_010483_020 Hb_010483_020 Hb_007766_010--Hb_010483_020 Hb_000258_430 Hb_000258_430 Hb_007766_010--Hb_000258_430 Hb_001696_030 Hb_001696_030 Hb_007766_010--Hb_001696_030 Hb_008408_030 Hb_008408_030 Hb_004724_040--Hb_008408_030 Hb_005455_070 Hb_005455_070 Hb_004724_040--Hb_005455_070 Hb_004724_040--Hb_000258_430 Hb_002326_030 Hb_002326_030 Hb_004724_040--Hb_002326_030 Hb_001366_230 Hb_001366_230 Hb_004724_040--Hb_001366_230 Hb_055335_010 Hb_055335_010 Hb_006070_010--Hb_055335_010 Hb_001315_020 Hb_001315_020 Hb_006070_010--Hb_001315_020 Hb_006120_200 Hb_006120_200 Hb_006070_010--Hb_006120_200 Hb_006070_010--Hb_000481_020 Hb_000762_020 Hb_000762_020 Hb_006070_010--Hb_000762_020 Hb_003777_180 Hb_003777_180 Hb_000481_020--Hb_003777_180 Hb_000184_040 Hb_000184_040 Hb_000481_020--Hb_000184_040 Hb_000481_020--Hb_006120_200 Hb_002681_020 Hb_002681_020 Hb_000481_020--Hb_002681_020 Hb_007919_050 Hb_007919_050 Hb_000481_020--Hb_007919_050 Hb_001205_090 Hb_001205_090 Hb_010483_020--Hb_001205_090 Hb_010483_020--Hb_000481_020 Hb_004659_120 Hb_004659_120 Hb_010483_020--Hb_004659_120 Hb_010483_020--Hb_001696_030 Hb_001922_190 Hb_001922_190 Hb_010483_020--Hb_001922_190 Hb_002450_050 Hb_002450_050 Hb_000258_430--Hb_002450_050 Hb_006551_010 Hb_006551_010 Hb_000258_430--Hb_006551_010 Hb_001017_090 Hb_001017_090 Hb_000258_430--Hb_001017_090 Hb_000028_470 Hb_000028_470 Hb_000258_430--Hb_000028_470 Hb_010174_130 Hb_010174_130 Hb_000258_430--Hb_010174_130 Hb_003404_030 Hb_003404_030 Hb_000258_430--Hb_003404_030 Hb_005167_040 Hb_005167_040 Hb_001696_030--Hb_005167_040 Hb_023988_020 Hb_023988_020 Hb_001696_030--Hb_023988_020 Hb_001696_030--Hb_001205_090 Hb_001696_030--Hb_004659_120 Hb_000376_110 Hb_000376_110 Hb_001696_030--Hb_000376_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
115.51 6.76078 2.9595 47.5528 51.4846 80.0141
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
94.1801 72.1864 82.289 8.47434 4.74567

CAGE analysis