Hb_000762_020

Information

Type -
Description -
Location Contig762: 18945-19856
Sequence    

Annotation

kegg
ID rcu:RCOM_1095370
description hypothetical protein
nr
ID XP_012081485.1
description PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LA54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09585 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000762_020 0.0 - - PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
2 Hb_000957_040 0.0678174313 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]
3 Hb_001140_160 0.0903548605 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
4 Hb_000184_040 0.0928647283 rubber biosynthesis Gene Name: Acetyl-CoA acetyltransferase PREDICTED: acetyl-CoA acetyltransferase, cytosolic 1-like isoform X2 [Nelumbo nucifera]
5 Hb_006120_200 0.1041049826 - - PREDICTED: uncharacterized protein LOC103333282 [Prunus mume]
6 Hb_012347_010 0.1108264387 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
7 Hb_001017_090 0.1167362498 - - -
8 Hb_001631_070 0.1167851694 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
9 Hb_004659_120 0.1186585003 rubber biosynthesis Gene Name: CPTL PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X3 [Jatropha curcas]
10 Hb_019516_040 0.1207200161 desease resistance Gene Name: AAA Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
11 Hb_010872_060 0.121838851 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
12 Hb_004032_440 0.1227865878 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A reductase RecName: Full=3-hydroxy-3-methylglutaryl-coenzyme A reductase 1; Short=HMG-CoA reductase 1 [Hevea brasiliensis]
13 Hb_006831_010 0.125893414 - - ABC transporter family protein [Hevea brasiliensis]
14 Hb_124315_040 0.1269468261 - - hypothetical protein 19 [Hevea brasiliensis]
15 Hb_002027_300 0.1270016421 - - PREDICTED: rho GTPase-activating protein 2 [Jatropha curcas]
16 Hb_002759_250 0.1282448849 rubber biosynthesis Gene Name: Phosphomevalonate kinase phosphomevalonate kinase [Hevea brasiliensis]
17 Hb_000510_100 0.1294477426 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
18 Hb_000997_260 0.1296225531 - - PREDICTED: rRNA-processing protein EFG1 isoform X1 [Jatropha curcas]
19 Hb_000707_080 0.1305087687 - - hypothetical protein AALP_AA4G156500, partial [Arabis alpina]
20 Hb_000130_390 0.1312982351 - - PREDICTED: glutamate receptor 2.8-like [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_000762_020 Hb_000762_020 Hb_000957_040 Hb_000957_040 Hb_000762_020--Hb_000957_040 Hb_001140_160 Hb_001140_160 Hb_000762_020--Hb_001140_160 Hb_000184_040 Hb_000184_040 Hb_000762_020--Hb_000184_040 Hb_006120_200 Hb_006120_200 Hb_000762_020--Hb_006120_200 Hb_012347_010 Hb_012347_010 Hb_000762_020--Hb_012347_010 Hb_001017_090 Hb_001017_090 Hb_000762_020--Hb_001017_090 Hb_000957_040--Hb_001140_160 Hb_000957_040--Hb_012347_010 Hb_000130_390 Hb_000130_390 Hb_000957_040--Hb_000130_390 Hb_010872_060 Hb_010872_060 Hb_000957_040--Hb_010872_060 Hb_002027_300 Hb_002027_300 Hb_000957_040--Hb_002027_300 Hb_004738_090 Hb_004738_090 Hb_001140_160--Hb_004738_090 Hb_003018_180 Hb_003018_180 Hb_001140_160--Hb_003018_180 Hb_001140_160--Hb_012347_010 Hb_000500_310 Hb_000500_310 Hb_001140_160--Hb_000500_310 Hb_001047_010 Hb_001047_010 Hb_000184_040--Hb_001047_010 Hb_004659_120 Hb_004659_120 Hb_000184_040--Hb_004659_120 Hb_000481_020 Hb_000481_020 Hb_000184_040--Hb_000481_020 Hb_023988_020 Hb_023988_020 Hb_000184_040--Hb_023988_020 Hb_002235_400 Hb_002235_400 Hb_000184_040--Hb_002235_400 Hb_006120_200--Hb_000481_020 Hb_001315_020 Hb_001315_020 Hb_006120_200--Hb_001315_020 Hb_006070_010 Hb_006070_010 Hb_006120_200--Hb_006070_010 Hb_006120_200--Hb_002027_300 Hb_006120_200--Hb_000957_040 Hb_012347_010--Hb_002027_300 Hb_012347_010--Hb_010872_060 Hb_124315_040 Hb_124315_040 Hb_012347_010--Hb_124315_040 Hb_012347_010--Hb_000130_390 Hb_002506_010 Hb_002506_010 Hb_001017_090--Hb_002506_010 Hb_001476_100 Hb_001476_100 Hb_001017_090--Hb_001476_100 Hb_009510_030 Hb_009510_030 Hb_001017_090--Hb_009510_030 Hb_010931_100 Hb_010931_100 Hb_001017_090--Hb_010931_100 Hb_000264_190 Hb_000264_190 Hb_001017_090--Hb_000264_190 Hb_000258_430 Hb_000258_430 Hb_001017_090--Hb_000258_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
136.317 7.46989 4.99114 16.4482 51.2125 87.661
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
149.114 44.8927 80.3776 9.68892 5.63701

CAGE analysis