Hb_007763_050

Information

Type -
Description -
Location Contig7763: 45532-48293
Sequence    

Annotation

kegg
ID cit:102615810
description alpha/beta hydrolase domain-containing protein 11-like
nr
ID XP_010098639.1
description hypothetical protein L484_012752 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9R7Y3
description Uncharacterized protein OS=Morus notabilis GN=L484_012752 PE=4 SV=1
Gene Ontology
ID GO:0016787
description alpha beta hydrolase domain-containing protein 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57815: 39212-64518
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007763_050 0.0 - - hypothetical protein L484_012752 [Morus notabilis]
2 Hb_166480_010 0.1270883384 - - PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis melo]
3 Hb_002168_010 0.1336335395 - - PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like isoform X4 [Vitis vinifera]
4 Hb_010368_030 0.1343189716 - - BnaA07g35570D [Brassica napus]
5 Hb_000015_070 0.1411237648 - - hypothetical protein POPTR_0001s22690g [Populus trichocarpa]
6 Hb_001396_250 0.1435612869 - - PREDICTED: stress-associated endoplasmic reticulum protein 2 [Jatropha curcas]
7 Hb_175976_010 0.1490299271 - - -
8 Hb_012675_080 0.1522171791 - - PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Populus euphratica]
9 Hb_002482_060 0.1534783693 - - hypothetical protein CICLE_v10033884mg, partial [Citrus clementina]
10 Hb_011214_100 0.1544251722 - - PREDICTED: uncharacterized protein LOC105633003 [Jatropha curcas]
11 Hb_000120_190 0.160669628 - - Pre-mRNA-splicing factor ini1 [Ricinus communis]
12 Hb_011037_020 0.1712435561 - - unknown [Picea sitchensis]
13 Hb_003688_110 0.1729893187 - - -
14 Hb_000710_070 0.1747410007 - - PREDICTED: uncharacterized protein LOC105645553 [Jatropha curcas]
15 Hb_025288_010 0.1759158258 - - PREDICTED: protein unc-50 homolog [Jatropha curcas]
16 Hb_000810_020 0.1792167775 - - -
17 Hb_002784_070 0.179253391 - - BnaUnng01470D [Brassica napus]
18 Hb_005085_030 0.1799343022 - - PREDICTED: N-acetyltransferase 9-like protein isoform X1 [Jatropha curcas]
19 Hb_003656_150 0.1817637858 - - -
20 Hb_000086_190 0.1835567543 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus]

Gene co-expression network

sample Hb_007763_050 Hb_007763_050 Hb_166480_010 Hb_166480_010 Hb_007763_050--Hb_166480_010 Hb_002168_010 Hb_002168_010 Hb_007763_050--Hb_002168_010 Hb_010368_030 Hb_010368_030 Hb_007763_050--Hb_010368_030 Hb_000015_070 Hb_000015_070 Hb_007763_050--Hb_000015_070 Hb_001396_250 Hb_001396_250 Hb_007763_050--Hb_001396_250 Hb_175976_010 Hb_175976_010 Hb_007763_050--Hb_175976_010 Hb_002482_060 Hb_002482_060 Hb_166480_010--Hb_002482_060 Hb_166480_010--Hb_001396_250 Hb_000120_190 Hb_000120_190 Hb_166480_010--Hb_000120_190 Hb_166480_010--Hb_000015_070 Hb_005085_030 Hb_005085_030 Hb_166480_010--Hb_005085_030 Hb_000317_140 Hb_000317_140 Hb_002168_010--Hb_000317_140 Hb_004669_030 Hb_004669_030 Hb_002168_010--Hb_004669_030 Hb_000641_020 Hb_000641_020 Hb_002168_010--Hb_000641_020 Hb_002168_010--Hb_000015_070 Hb_000635_070 Hb_000635_070 Hb_002168_010--Hb_000635_070 Hb_010368_030--Hb_175976_010 Hb_000086_190 Hb_000086_190 Hb_010368_030--Hb_000086_190 Hb_010368_030--Hb_000120_190 Hb_007534_020 Hb_007534_020 Hb_010368_030--Hb_007534_020 Hb_010368_030--Hb_166480_010 Hb_000015_070--Hb_001396_250 Hb_003371_170 Hb_003371_170 Hb_000015_070--Hb_003371_170 Hb_108227_010 Hb_108227_010 Hb_000015_070--Hb_108227_010 Hb_011214_100 Hb_011214_100 Hb_000015_070--Hb_011214_100 Hb_012675_080 Hb_012675_080 Hb_000015_070--Hb_012675_080 Hb_001396_250--Hb_011214_100 Hb_001396_250--Hb_012675_080 Hb_014050_010 Hb_014050_010 Hb_001396_250--Hb_014050_010 Hb_002784_070 Hb_002784_070 Hb_001396_250--Hb_002784_070 Hb_008221_110 Hb_008221_110 Hb_175976_010--Hb_008221_110 Hb_175976_010--Hb_007534_020 Hb_175976_010--Hb_000120_190 Hb_000127_090 Hb_000127_090 Hb_175976_010--Hb_000127_090 Hb_001017_060 Hb_001017_060 Hb_175976_010--Hb_001017_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.61331 0.982191 3.27831 42.1544 5.73563 62.8776
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.2901 22.4586 8.25191 4.76153 6.6667

CAGE analysis