Hb_005643_040

Information

Type -
Description -
Location Contig5643: 26969-30880
Sequence    

Annotation

kegg
ID rcu:RCOM_1438710
description zinc finger protein, putative (EC:1.3.1.74)
nr
ID XP_002512693.1
description zinc finger protein, putative [Ricinus communis]
swissprot
ID Q0WQK2
description Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana GN=PAT07 PE=1 SV=1
trembl
ID B9RG24
description S-acyltransferase OS=Ricinus communis GN=RCOM_1438710 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable protein s-acyltransferase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005643_040 0.0 - - zinc finger protein, putative [Ricinus communis]
2 Hb_004228_070 0.110835034 - - PREDICTED: uncharacterized protein LOC103338699 [Prunus mume]
3 Hb_007221_040 0.1153571011 - - PREDICTED: probable receptor-like protein kinase At5g24010 isoform X2 [Populus euphratica]
4 Hb_003454_050 0.1188630945 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
5 Hb_021576_130 0.1200852775 - - PREDICTED: chorismate mutase 2 isoform X1 [Jatropha curcas]
6 Hb_007123_010 0.1235279543 - - PREDICTED: auxin efflux carrier component 3-like [Jatropha curcas]
7 Hb_007130_020 0.125377551 - - -
8 Hb_002205_150 0.1266244344 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
9 Hb_054926_010 0.1270803273 - - glutamate receptor 2 plant, putative [Ricinus communis]
10 Hb_017491_010 0.1277609956 - - PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]
11 Hb_003581_050 0.1280467872 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-54 [Jatropha curcas]
12 Hb_008749_010 0.1286839043 - - PREDICTED: auxin efflux carrier component 3-like [Jatropha curcas]
13 Hb_044653_050 0.1299750016 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
14 Hb_001339_030 0.1307968847 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 11-like [Jatropha curcas]
15 Hb_039075_020 0.1313296565 - - PREDICTED: uncharacterized protein LOC103331245 [Prunus mume]
16 Hb_003266_090 0.134821068 - - PREDICTED: basic 7S globulin 2-like [Jatropha curcas]
17 Hb_124677_090 0.1349995245 - - conserved hypothetical protein [Ricinus communis]
18 Hb_006922_020 0.1386652086 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
19 Hb_000103_370 0.141115617 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
20 Hb_002518_220 0.1413462228 - - PREDICTED: uncharacterized protein LOC105631001 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_005643_040 Hb_005643_040 Hb_004228_070 Hb_004228_070 Hb_005643_040--Hb_004228_070 Hb_007221_040 Hb_007221_040 Hb_005643_040--Hb_007221_040 Hb_003454_050 Hb_003454_050 Hb_005643_040--Hb_003454_050 Hb_021576_130 Hb_021576_130 Hb_005643_040--Hb_021576_130 Hb_007123_010 Hb_007123_010 Hb_005643_040--Hb_007123_010 Hb_007130_020 Hb_007130_020 Hb_005643_040--Hb_007130_020 Hb_004228_070--Hb_021576_130 Hb_002205_150 Hb_002205_150 Hb_004228_070--Hb_002205_150 Hb_004228_070--Hb_003454_050 Hb_004228_070--Hb_007123_010 Hb_044653_050 Hb_044653_050 Hb_004228_070--Hb_044653_050 Hb_006922_020 Hb_006922_020 Hb_004228_070--Hb_006922_020 Hb_007221_040--Hb_004228_070 Hb_007221_040--Hb_002205_150 Hb_007221_040--Hb_021576_130 Hb_007221_040--Hb_003454_050 Hb_000434_060 Hb_000434_060 Hb_007221_040--Hb_000434_060 Hb_012539_100 Hb_012539_100 Hb_007221_040--Hb_012539_100 Hb_106089_010 Hb_106089_010 Hb_003454_050--Hb_106089_010 Hb_003454_050--Hb_002205_150 Hb_142026_010 Hb_142026_010 Hb_003454_050--Hb_142026_010 Hb_002902_040 Hb_002902_040 Hb_003454_050--Hb_002902_040 Hb_026240_020 Hb_026240_020 Hb_003454_050--Hb_026240_020 Hb_039075_020 Hb_039075_020 Hb_021576_130--Hb_039075_020 Hb_021576_130--Hb_007123_010 Hb_021576_130--Hb_003454_050 Hb_021576_130--Hb_002205_150 Hb_021576_130--Hb_006922_020 Hb_007123_010--Hb_006922_020 Hb_000103_370 Hb_000103_370 Hb_007123_010--Hb_000103_370 Hb_054926_010 Hb_054926_010 Hb_007123_010--Hb_054926_010 Hb_002490_060 Hb_002490_060 Hb_007123_010--Hb_002490_060 Hb_007130_020--Hb_044653_050 Hb_002311_280 Hb_002311_280 Hb_007130_020--Hb_002311_280 Hb_000836_090 Hb_000836_090 Hb_007130_020--Hb_000836_090 Hb_007130_020--Hb_006922_020 Hb_033006_020 Hb_033006_020 Hb_007130_020--Hb_033006_020 Hb_007130_020--Hb_004228_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0245074 0.251485 0.382915 0.413292 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.052485 0.276507

CAGE analysis